RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PYCR3Q53H96 274 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 ARMC12Q5T9G4 340 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 RAET1GQ6H3X3 334 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 IGF2-ASQ6U949 168 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 PLD5Q8N7P1 536 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 LPCAT1Q8NF37 534 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 NAT14Q8WUY8 206 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 HTR3CQ8WXA8 447 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 FAF2Q96CS3 445 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 AP2M1Q96CW1 435 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 SCARF2Q96GP6 870 aaPredicted RBP8.04□□□□□ -1.12
USP48-207ENST00000471752 LIN37Q96GY3 246 aaPredicted RBP8.04□□□□□ -1.12
USP48-207ENST00000471752 GOLPH3Q9H4A6 298 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 C10orf88Q9H8K7 445 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 OCIAD1Q9NX40 245 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 NCKIPSDQ9NZQ3 722 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 SCHIP1Q9P0W5 487 aaPredicted RBP8.04□□□□□ -1.12
USP48-207ENST00000471752 TMPRSS11EQ9UL52 423 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 TTLL3Q9Y4R7 772 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 COL6A6A6NMZ7 2263 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 TEX51A0A1B0GUA7 166 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 EIF4E1BA6NMX2 242 aaKnown RBP8.03□□□□□ -1.12
USP48-207ENST00000471752 F5H423 210 aaPredicted RBP8.03□□□□□ -1.12
USP48-207ENST00000471752 K7ENP7 123 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 AURKAO14965 403 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 DNAJC6O75061 913 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 ITGA2BP08514 1039 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 TNNT1P13805 278 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 HNRNPH3P31942 346 aaKnown RBP8.03□□□□□ -1.12
USP48-207ENST00000471752 CCKBRP32239 447 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 ACTR1BP42025 376 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 GPR1P46091 355 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 TMPRSS3P57727 454 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 ACTR1AP61163 376 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 DPTQ07507 201 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 ARHGEF7Q14155 803 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 GALNT3Q14435 633 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 KHDC1Q4VXA5 237 aaKnown RBP8.03□□□□□ -1.12
USP48-207ENST00000471752 TAF1BQ53T94 588 aaPredicted RBP8.03□□□□□ -1.12
USP48-207ENST00000471752 PHF19Q5T6S3 580 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 ALG1LQ6GMV1 187 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 PPP1R2P3Q6NXS1 205 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 INO80CQ6PI98 192 aaPredicted RBP8.03□□□□□ -1.12
USP48-207ENST00000471752 ADAMTSL4Q6UY14 1074 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 ZNF438Q7Z4V0 828 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 GPR26Q8NDV2 337 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 SPATA22Q8NHS9 363 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 SLC35G2Q8TBE7 412 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 SNRNP27Q8WVK2 155 aaKnown RBP8.03□□□□□ -1.12
USP48-207ENST00000471752 EXTL1Q92935 676 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 TRIM11Q96F44 468 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 COX14Q96I36 57 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 TSGA13Q96PP4 275 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 RNF157Q96PX1 679 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 TRIB3Q96RU7 358 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 TDRD1Q9BXT4 1180 aaKnown RBP8.03□□□□□ -1.12
USP48-207ENST00000471752 DPH1Q9BZG8 443 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 PHPT1Q9NRX4 125 aaPredicted RBP8.03□□□□□ -1.12
USP48-207ENST00000471752 DONSONQ9NYP3 566 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 UBP1Q9NZI7 540 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 TBC1D29Q9UFV1 150 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 SLC23A2Q9UGH3 650 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 SHOC2Q9UQ13 582 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 SPO11Q9Y5K1 396 aa8.03□□□□□ -1.12
USP48-207ENST00000471752 NAV2Q8IVL1 2488 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 IGHV1OR21-1A0A087WYE8 117 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 A8MU76 341 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 NUDT21O43809 227 aaKnown RBP8.02□□□□□ -1.13
USP48-207ENST00000471752 MTX2O75431 263 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 IVLP07476 585 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 CYP2A6P11509 494 aaPredicted RBP8.02□□□□□ -1.13
USP48-207ENST00000471752 CCNCP24863 283 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 HSPA9P38646 679 aaKnown RBP8.02□□□□□ -1.13
USP48-207ENST00000471752 MARCKSL1P49006 195 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 ZNF135P52742 658 aaPredicted RBP8.02□□□□□ -1.13
USP48-207ENST00000471752 DYNLT1P63172 113 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 C19orf57Q0VDD7 668 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 SLC18A3Q16572 532 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 MFSD7Q6UXD7 560 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 CCDC81Q6ZN84 652 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 CHST15Q7LFX5 561 aaPredicted RBP8.02□□□□□ -1.13
USP48-207ENST00000471752 LYSMD3Q7Z3D4 306 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 DTX1Q86Y01 620 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 RNF214Q8ND24 703 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 CCNYQ8ND76 341 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 SLC37A2Q8TED4 501 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 CCDC74BQ96LY2 380 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 CCNL2Q96S94 520 aaPredicted RBP8.02□□□□□ -1.13
USP48-207ENST00000471752 DNAJC7Q99615 494 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 CTRCQ99895 268 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 HERPUD2Q9BSE4 406 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 PCDH9Q9HC56 1237 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 PRDM8Q9NQV8 689 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 TRNAU1APQ9NX07 287 aaKnown RBP8.02□□□□□ -1.13
USP48-207ENST00000471752 SEPT10Q9P0V9 454 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 ZNHIT2Q9UHR6 403 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 KCNK6Q9Y257 313 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 PCDHGA7Q9Y5G6 932 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 HEY1Q9Y5J3 304 aa8.02□□□□□ -1.13
USP48-207ENST00000471752 BZW2Q9Y6E2 419 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms