RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 SLC30A9Q6PML9 568 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 RFX8Q6ZV50 586 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 USP45Q70EL2 814 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 TMPRSS9Q7Z410 1059 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 FAM129CQ86XR2 697 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 PSTKQ8IV42 348 aaKnown RBP9.1□□□□□ -0.95
CPSF4-211ENST00000471455 LZTR1Q8N653 840 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 RCBTB1Q8NDN9 531 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 OR10G6Q8NH81 332 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 CCL4L1Q8NHW4 92 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 C9orf43Q8TAL5 461 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-211ENST00000471455 PDCD6IPQ8WUM4 868 aaKnown RBP9.1□□□□□ -0.95
CPSF4-211ENST00000471455 JPH3Q8WXH2 748 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-211ENST00000471455 ART4Q93070 314 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 DTD2Q96FN9 168 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 COQ10AQ96MF6 247 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 PSKH2Q96QS6 385 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 LGR4Q9BXB1 951 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 TEX101Q9BY14 249 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 FRMD8Q9BZ67 464 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-211ENST00000471455 MAGEB5Q9BZ81 275 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 SLC39A8Q9C0K1 460 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 NUP62CLQ9H1M0 184 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 TRIT1Q9H3H1 467 aaKnown RBP9.1□□□□□ -0.95
CPSF4-211ENST00000471455 DHX35Q9H5Z1 703 aaKnown RBP9.1□□□□□ -0.95
CPSF4-211ENST00000471455 SUDS3Q9H7L9 328 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-211ENST00000471455 GPN2Q9H9Y4 310 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-211ENST00000471455 SAMSN1Q9NSI8 373 aaKnown RBP9.1□□□□□ -0.95
CPSF4-211ENST00000471455 SPATS2LQ9NUQ6 558 aaKnown RBP9.1□□□□□ -0.95
CPSF4-211ENST00000471455 HAUS2Q9NVX0 235 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 GOLGA6AQ9NYA3 693 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 ANKMY1Q9P2S6 941 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 B4GALT6Q9UBX8 382 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 SUFUQ9UMX1 484 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 SLC17A4Q9Y2C5 497 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 SDK2Q58EX2 2172 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 IGHV1OR21-1A0A087WYE8 117 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 CYSRT1A8MQ03 144 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 TRAFD1O14545 582 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-211ENST00000471455 PRPSAP2O60256 369 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 HEXIM1O94992 359 aaKnown RBP9.09□□□□□ -0.95
CPSF4-211ENST00000471455 CEACAM5P06731 702 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 FGF3P11487 239 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-211ENST00000471455 SLC2A4P14672 509 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 WT1P19544 449 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-211ENST00000471455 PSMA2P25787 234 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 MAP4P27816 1152 aaKnown RBP9.09□□□□□ -0.95
CPSF4-211ENST00000471455 CD1CP29017 333 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 ACTR1BP42025 376 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 RGRP47804 291 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 COPB1P53618 953 aaKnown RBP9.09□□□□□ -0.95
CPSF4-211ENST00000471455 ACTR1AP61163 376 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 UBAP2LQ14157 1087 aaKnown RBP9.09□□□□□ -0.95
CPSF4-211ENST00000471455 LBRQ14739 615 aaKnown RBP9.09□□□□□ -0.95
CPSF4-211ENST00000471455 CNGA3Q16281 694 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 ERMARDQ5T6L9 678 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 DENND2CQ68D51 928 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 TMEM71Q6P5X7 295 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 CEACAM20Q6UY09 585 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 NRSN1Q8IZ57 195 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 NLGN4XQ8N0W4 816 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 AVL9Q8NBF6 648 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 NLGN4YQ8NFZ3 816 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-211ENST00000471455 ENOX1Q8TC92 643 aaKnown RBP9.09□□□□□ -0.95
CPSF4-211ENST00000471455 SH3KBP1Q96B97 665 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 SLC45A3Q96JT2 553 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 OR2M4Q96R27 311 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 PCDHB18PQ96TA0 734 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 SLC38A3Q99624 504 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 AGPAT1Q99943 283 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 ZWILCHQ9H900 591 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 TIMMDC1Q9NPL8 285 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 PARVAQ9NVD7 372 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 DNPEPQ9ULA0 475 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 PHTF1Q9UMS5 762 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 B3GALT1Q9Y5Z6 326 aa9.09□□□□□ -0.95
CPSF4-211ENST00000471455 TCRBV5S1A1TA0A578 114 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 EFCAB7A8K855 629 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 A8MX80 341 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 H3BRJ5 948 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 HTRA2O43464 458 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-211ENST00000471455 ATP1A3P13637 1013 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 FERP16591 822 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 ERCC2P18074 760 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 AK4P27144 223 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-211ENST00000471455 ADCY8P40145 1251 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 GPR1P46091 355 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 FASLGP48023 281 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 HCAR3P49019 387 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 EPHA4P54764 986 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 RPL7AP62424 266 aaKnown RBP9.08□□□□□ -0.96
CPSF4-211ENST00000471455 CTBSQ01459 385 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 DPTQ07507 201 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 CDC20Q12834 499 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 KRT31Q15323 416 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 PPP6R3Q5H9R7 873 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-211ENST00000471455 ARMC12Q5T9G4 340 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 ACAD10Q6JQN1 1059 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 ATCAYQ86WG3 371 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 PTRH1Q86Y79 214 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms