RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 IL17CQ9P0M4 197 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 ARL5AQ9Y689 179 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 SAR1BQ9Y6B6 198 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 GOLGA4Q13439 2230 aaKnown RBP19.65■□□□□ 0.74
HDAC7-220ENST00000471235 INPP4BO15327 924 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 BUD23O43709 281 aaKnown RBP19.64■□□□□ 0.73
HDAC7-220ENST00000471235 SUN1O94901 812 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 RASGRP1O95267 797 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 KCNK5O95279 499 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 HK3P52790 923 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 TAF1AQ15573 450 aaPredicted RBP19.64■□□□□ 0.73
HDAC7-220ENST00000471235 CCDC137Q6PK04 289 aaKnown RBP19.64■□□□□ 0.73
HDAC7-220ENST00000471235 C4orf22Q6V702 233 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 DGLUCYQ7Z3D6 616 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 CREG2Q8IUH2 290 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 SLC25A45Q8N413 288 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 TRAM1L1Q8N609 369 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 BTN2A2Q8WVV5 523 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 COX14Q96I36 57 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 HIC2Q96JB3 615 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 TBATAQ96M53 351 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 PLEKHG4BQ96PX9 1271 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 SPATA16Q9BXB7 569 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 PIH1D1Q9NWS0 290 aaKnown RBP19.64■□□□□ 0.73
HDAC7-220ENST00000471235 CNOT6Q9ULM6 557 aaKnown RBP19.64■□□□□ 0.73
HDAC7-220ENST00000471235 PTPRBP23467 1997 aa19.64■□□□□ 0.73
HDAC7-220ENST00000471235 PRSS38A1L453 326 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 E7EVH7 732 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 PDE2AO00408 941 aaPredicted RBP19.63■□□□□ 0.73
HDAC7-220ENST00000471235 TNFRSF10CO14798 259 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 SCAMP1O15126 338 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 FFAR2O15552 330 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 AQP9O43315 295 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 GIMD1P0DJR0 217 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 CEACAM1P13688 526 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 KCNA4P22459 653 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 LMAN1P49257 510 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 FNTAP49354 379 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 ETF1P62495 437 aaKnown RBP19.63■□□□□ 0.73
HDAC7-220ENST00000471235 BASP1P80723 227 aaKnown RBP19.63■□□□□ 0.73
HDAC7-220ENST00000471235 PTPRCAPQ14761 206 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 PPM1JQ5JR12 505 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 DOK6Q6PKX4 331 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 RD3Q7Z3Z2 195 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 EID2Q8N6I1 236 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 OR52K1Q8NGK4 314 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 LMX1AQ8TE12 382 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 RHBDD1Q8TEB9 315 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 PTCD2Q8WV60 388 aaKnown RBP19.63■□□□□ 0.73
HDAC7-220ENST00000471235 ZSCAN5AQ9BUG6 496 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 SLC13A1Q9BZW2 595 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 EIF2B3Q9NR50 452 aaKnown RBP19.63■□□□□ 0.73
HDAC7-220ENST00000471235 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.63■□□□□ 0.73
HDAC7-220ENST00000471235 SPASTQ9UBP0 616 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 DGKBQ9Y6T7 804 aa19.63■□□□□ 0.73
HDAC7-220ENST00000471235 BPTFQ12830 3046 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 KRT14P02533 472 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 CEACAM5P06731 702 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 APRTP07741 180 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 CELA2BP08218 269 aaPredicted RBP19.62■□□□□ 0.73
HDAC7-220ENST00000471235 TPH1P17752 444 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 LPOP22079 712 aaPredicted RBP19.62■□□□□ 0.73
HDAC7-220ENST00000471235 SPAM1P38567 509 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 VPS41P49754 854 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 BLKP51451 505 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 ZNF140P52738 457 aaPredicted RBP19.62■□□□□ 0.73
HDAC7-220ENST00000471235 C1orf61Q13536 156 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 TRIP13Q15645 432 aaPredicted RBP19.62■□□□□ 0.73
HDAC7-220ENST00000471235 PRRT3Q5FWE3 981 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 PDPK2PQ6A1A2 396 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 LINC00523Q86TU6 105 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 BRSK1Q8TDC3 778 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 CYP4F12Q9HCS2 524 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.62■□□□□ 0.73
HDAC7-220ENST00000471235 SLC17A4Q9Y2C5 497 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 PKP3Q9Y446 797 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 KCTD3Q9Y597 815 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 OAS3Q9Y6K5 1087 aaKnown RBP19.62■□□□□ 0.73
HDAC7-220ENST00000471235 PIKFYVEQ9Y2I7 2098 aa19.62■□□□□ 0.73
HDAC7-220ENST00000471235 SPAARA0A1B0GVQ0 90 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 C2orf81A6NN90 581 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 GAPDHSO14556 408 aaPredicted RBP19.61■□□□□ 0.73
HDAC7-220ENST00000471235 STX7O15400 261 aaKnown RBP19.61■□□□□ 0.73
HDAC7-220ENST00000471235 CRTAMO95727 393 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 TNFP01375 233 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 GRIA1P42261 906 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 POLD2P49005 469 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 TCEA2Q15560 299 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 SYT10Q6XYQ8 523 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 PPP1R21Q6ZMI0 780 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 OR4K2Q8NGD2 314 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 OR4C6Q8NH72 309 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 CLPBQ9H078 707 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 DDX47Q9H0S4 455 aaKnown RBP19.61■□□□□ 0.73
HDAC7-220ENST00000471235 IL26Q9NPH9 171 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 FTSJ1Q9UET6 329 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 MOSPD1Q9UJG1 213 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 TMEM98Q9Y2Y6 226 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 NEU2Q9Y3R4 380 aa19.61■□□□□ 0.73
HDAC7-220ENST00000471235 CSNK1G3Q9Y6M4 447 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms