RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 B8ZZF3 427 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 C9orf172C9J069 976 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.39■□□□□ 0.37
COL7A1-208ENST00000470076 GOLGA6L19H0YKK7 550 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 J3QKU1 62 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 PPM1DO15297 605 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 PROSCO94903 275 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 GYPCP04921 128 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 KRT7P08729 469 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 MX2P20592 715 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 GJC1P36383 396 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 SQSTM1Q13501 440 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 TRA2AQ13595 282 aaKnown RBP eCLIP17.39■□□□□ 0.37
COL7A1-208ENST00000470076 LRP8Q14114 963 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 ATP13A4Q4VNC1 1196 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 PYCR3Q53H96 274 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 MANEAQ5SRI9 462 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 XKR5Q6UX68 686 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 ZFAND4Q86XD8 727 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 DTX1Q86Y01 620 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 SMIM14Q96QK8 99 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 DPYSL5Q9BPU6 564 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 CTTNBP2NLQ9P2B4 639 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 UVRAGQ9P2Y5 699 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 NENFQ9UMX5 172 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 CHKBQ9Y259 395 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 TTLL3Q9Y4R7 772 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 BOD1L1Q8NFC6 3051 aa17.39■□□□□ 0.37
COL7A1-208ENST00000470076 SPTA1P02549 2419 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 MAP3K6O95382 1288 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 ITGB2P05107 769 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 LIMK2P53671 638 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 IHHQ14623 411 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 TRIM74Q86UV6 250 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 GALNT13Q8IUC8 556 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.38■□□□□ 0.37
COL7A1-208ENST00000470076 RCBTB1Q8NDN9 531 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 OR4D9Q8NGE8 314 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 ARRDC2Q8TBH0 407 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 FAF2Q96CS3 445 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 COX14Q96I36 57 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 CCDC74BQ96LY2 380 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 LYSMD1Q96S90 227 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 AGAP2Q99490 1192 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 RIOK2Q9BVS4 552 aaKnown RBP17.38■□□□□ 0.37
COL7A1-208ENST00000470076 PCDH9Q9HC56 1237 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 PLEKHM1Q9Y4G2 1056 aa17.38■□□□□ 0.37
COL7A1-208ENST00000470076 TLN1Q9Y490 2541 aaKnown RBP17.38■□□□□ 0.37
COL7A1-208ENST00000470076 IGHV1OR21-1A0A087WYE8 117 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 ZIC2O95409 532 aaPredicted RBP17.37■□□□□ 0.37
COL7A1-208ENST00000470076 CLDN7O95471 211 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 ASMTLO95671 621 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 PRLP01236 227 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 HLA-DQB2P05538 268 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 H2AFZP0C0S5 128 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 CCL4P13236 92 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 FASLGP48023 281 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 GPLD1P80108 840 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 SRSF6Q13247 344 aaKnown RBP17.37■□□□□ 0.37
COL7A1-208ENST00000470076 H2AFVQ71UI9 128 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 MARK2Q7KZI7 788 aaKnown RBP17.37■□□□□ 0.37
COL7A1-208ENST00000470076 ZSCAN1Q8NBB4 408 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 AGBL5Q8NDL9 886 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 CCDC112Q8NEF3 446 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 CTNNBL1Q8WYA6 563 aaPredicted RBP17.37■□□□□ 0.37
COL7A1-208ENST00000470076 HDAC11Q96DB2 347 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 TAAR9Q96RI9 348 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 KCNK4Q9NYG8 393 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 VPS18Q9P253 973 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 PCDHGA3Q9Y5H0 932 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 SDK2Q58EX2 2172 aa17.37■□□□□ 0.37
COL7A1-208ENST00000470076 STMND1H3BQB6 276 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 INPP4BO15327 924 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 HNRNPH3P31942 346 aaKnown RBP17.36■□□□□ 0.37
COL7A1-208ENST00000470076 CASP14P31944 242 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 TAS2R40P59535 323 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 GBE1Q04446 702 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 NIPAL4Q0D2K0 466 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 NKAIN2Q5VXU1 208 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 VASH2Q86V25 355 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 CPNE8Q86YQ8 564 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 CCDC13Q8IYE1 715 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 SFRP1Q8N474 314 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 PQLC3Q8N755 202 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 CCNYQ8ND76 341 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 LPCAT1Q8NF37 534 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 ZNF830Q96NB3 372 aaPredicted RBP17.36■□□□□ 0.37
COL7A1-208ENST00000470076 IFNKQ9P0W0 207 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 PCDHGA4Q9Y5G9 962 aa17.36■□□□□ 0.37
COL7A1-208ENST00000470076 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.36■□□□□ 0.37
COL7A1-208ENST00000470076 C1orf232A0A0U1RR37 186 aa17.35■□□□□ 0.37
COL7A1-208ENST00000470076 RGSL1A5PLK6 1076 aa17.35■□□□□ 0.37
COL7A1-208ENST00000470076 TPM3P06753 285 aa17.35■□□□□ 0.37
COL7A1-208ENST00000470076 THRAP10827 490 aa17.35■□□□□ 0.37
COL7A1-208ENST00000470076 FGF3P11487 239 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-208ENST00000470076 CSTF2P33240 577 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL7A1-208ENST00000470076 MAN1A1P33908 653 aa17.35■□□□□ 0.37
COL7A1-208ENST00000470076 SLC10A2Q12908 348 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-208ENST00000470076 SLC18A3Q16572 532 aa17.35■□□□□ 0.37
COL7A1-208ENST00000470076 ZFYVE27Q5T4F4 411 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms