RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 GCN1Q92616 2671 aaKnown RBP16.22■□□□□ 0.19
COL9A3-208ENST00000469802 C1QL1O75973 258 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 CLDN7O95471 211 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 ECEL1O95672 775 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 JCHAINP01591 159 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 TPM1P09493 284 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 HGFP14210 728 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 CD86P42081 329 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 TBX2Q13207 712 aaPredicted RBP16.21■□□□□ 0.19
COL9A3-208ENST00000469802 CLN3Q13286 438 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 QPCTQ16769 361 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 PYCR3Q53H96 274 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 ZFYVE27Q5T4F4 411 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 HENMT1Q5T8I9 393 aaKnown RBP16.21■□□□□ 0.19
COL9A3-208ENST00000469802 DOK6Q6PKX4 331 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 EXD1Q8NHP7 514 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 PATE1Q8WXA2 126 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 TMEM159Q96B96 161 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 CCDC42Q96M95 316 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 TRIB3Q96RU7 358 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 RIOK2Q9BVS4 552 aaKnown RBP16.21■□□□□ 0.19
COL9A3-208ENST00000469802 INTUQ9ULD6 942 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 TMEM98Q9Y2Y6 226 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 LOXL2Q9Y4K0 774 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 HEY1Q9Y5J3 304 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 SDK2Q58EX2 2172 aa16.21■□□□□ 0.19
COL9A3-208ENST00000469802 ZNF106Q9H2Y7 1883 aaKnown RBP16.2■□□□□ 0.18
COL9A3-208ENST00000469802 C1orf232A0A0U1RR37 186 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 ANKRD66B4E2M5 251 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 APOL1O14791 398 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 B4GAT1O43505 415 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 CPNE6O95741 557 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 KRT1P04264 644 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 SLC5A2P31639 672 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 ACTR1BP42025 376 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 SPINT3P49223 89 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 ACTR1AP61163 376 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 PEX6Q13608 980 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 LRP8Q14114 963 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 SLC14A2Q15849 920 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 CLPPQ16740 277 aaPredicted RBP16.2■□□□□ 0.18
COL9A3-208ENST00000469802 CNGA4Q8IV77 575 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 SLC39A7Q92504 469 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 TADA1Q96BN2 335 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 IMP4Q96G21 291 aaKnown RBP16.2■□□□□ 0.18
COL9A3-208ENST00000469802 VPS18Q9P253 973 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 CNOT6Q9ULM6 557 aaKnown RBP16.2■□□□□ 0.18
COL9A3-208ENST00000469802 PLEKHM1Q9Y4G2 1056 aa16.2■□□□□ 0.18
COL9A3-208ENST00000469802 PCYT1BQ9Y5K3 369 aaPredicted RBP16.2■□□□□ 0.18
COL9A3-208ENST00000469802 RGSL1A5PLK6 1076 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 FADS2P1A8MWK0 482 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 ERVH48-1M5A8F1 160 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 INPP4BO15327 924 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 NVLO15381 856 aaKnown RBP16.19■□□□□ 0.18
COL9A3-208ENST00000469802 DNAJC6O75061 913 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 SLC1A1P43005 524 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 GPR3P46089 330 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 OR1D5P58170 312 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 VAC14Q08AM6 782 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 PDK1Q15118 436 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 TAZQ16635 292 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 MAP9Q49MG5 647 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 NPNTQ6UXI9 565 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 RNF214Q8ND24 703 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-208ENST00000469802 EID2BQ96D98 161 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 MLPHQ9BV36 600 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-208ENST00000469802 SEMA6CQ9H3T2 930 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 RDH14Q9HBH5 336 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 NFKBIL1Q9UBC1 381 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-208ENST00000469802 OAS3Q9Y6K5 1087 aaKnown RBP16.19■□□□□ 0.18
COL9A3-208ENST00000469802 COL6A6A6NMZ7 2263 aa16.19■□□□□ 0.18
COL9A3-208ENST00000469802 RHPN2P1A8MT19 583 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 K7ENP7 123 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 PPP1R12AO14974 1030 aaPredicted RBP16.18■□□□□ 0.18
COL9A3-208ENST00000469802 PPM1DO15297 605 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 PRB1P04280 392 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 JMJD7P0C870 316 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 ZFXP17010 805 aaPredicted RBP16.18■□□□□ 0.18
COL9A3-208ENST00000469802 ITIH1P19827 911 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 CD1CP29017 333 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 ETV5P41161 510 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 FASLGP48023 281 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 HADHBP55084 474 aaKnown RBP16.18■□□□□ 0.18
COL9A3-208ENST00000469802 RHDQ02161 417 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 AP1B1Q10567 949 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 SQSTM1Q13501 440 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 GALNT3Q14435 633 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 C16orf72Q14CZ0 275 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 ARHGAP40Q5TG30 622 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 INO80CQ6PI98 192 aaPredicted RBP16.18■□□□□ 0.18
COL9A3-208ENST00000469802 ZNF574Q6ZN55 896 aaPredicted RBP16.18■□□□□ 0.18
COL9A3-208ENST00000469802 LYSMD3Q7Z3D4 306 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 GALNT13Q8IUC8 556 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 RHOT1Q8IXI2 618 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 CMKLR1Q99788 373 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 NUDT22Q9BRQ3 303 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 ADGRE3Q9BY15 652 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 CEP41Q9BYV8 373 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 BRD8Q9H0E9 1235 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms