RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 DNMT3BQ9UBC3 853 aaKnown RBP6.47□□□□□ -1.37
PTCD3-208ENST00000469585 MUTYHQ9UIF7 546 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 LSM7Q9UK45 103 aaKnown RBP6.47□□□□□ -1.37
PTCD3-208ENST00000469585 PADI4Q9UM07 663 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 COQ4Q9Y3A0 265 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 MTCL1Q9Y4B5 1905 aaKnown RBP6.46□□□□□ -1.37
PTCD3-208ENST00000469585 SYCE3A1L190 88 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 TYW5A2RUC4 315 aaKnown RBP6.46□□□□□ -1.38
PTCD3-208ENST00000469585 MYBPHLA2RUH7 354 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 M0QYV0 167 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 THAP12O43422 761 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 ECI2O75521 394 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 MBL2P11226 248 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-208ENST00000469585 PSMC3P17980 439 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 ITGALP20701 1170 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 SCN1AP35498 2009 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 BUD31P41223 144 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-208ENST00000469585 ACADSBP45954 432 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 IFNAR2P48551 515 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 PXNP49023 591 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-208ENST00000469585 E2F5Q15329 346 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 TEAD2Q15562 447 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 HSP90AA4PQ58FG1 418 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 HECTD3Q5T447 861 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 KLHDC7AQ5VTJ3 777 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 PPP1R2P3Q6NXS1 205 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 TRIM65Q6PJ69 517 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 TMEM108Q6UXF1 575 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 RBM43Q6ZSC3 357 aaKnown RBP6.46□□□□□ -1.38
PTCD3-208ENST00000469585 RRAGAQ7L523 313 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 VPS36Q86VN1 386 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 MAB21L3Q8N8X9 362 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 IQCDQ96DY2 449 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 OSBPL9Q96SU4 736 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 HNRNPABQ99729 332 aaKnown RBP6.46□□□□□ -1.38
PTCD3-208ENST00000469585 BPIFA3Q9BQP9 254 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 CRACR2AQ9BSW2 395 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 ZNF747Q9BV97 191 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 MLST8Q9BVC4 326 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 DUSP16Q9BY84 665 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 TSPY26PQ9H489 355 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 OLA1Q9NTK5 396 aaKnown RBP6.46□□□□□ -1.38
PTCD3-208ENST00000469585 TMEM51Q9NW97 253 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 HCFC1R1Q9NWW0 138 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 DUSP12Q9UNI6 340 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 SHOC2Q9UQ13 582 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 TBC1D30Q9Y2I9 924 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 VWA8A3KMH1 1905 aa6.46□□□□□ -1.38
PTCD3-208ENST00000469585 PLXNA3P51805 1871 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 A0A1W2PPC4 97 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 F5H697 171 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 PI4K2BG5E9Z4 385 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 CAPN9O14815 690 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ATP2C2O75185 946 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 NOL4O94818 638 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ANXA2P07355 339 aaKnown RBP6.45□□□□□ -1.38
PTCD3-208ENST00000469585 EGR2P11161 476 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-208ENST00000469585 CCDC130P13994 396 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 CEBPBP17676 345 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ATP5C1P36542 298 aaKnown RBP6.45□□□□□ -1.38
PTCD3-208ENST00000469585 CARSP49589 748 aaKnown RBP6.45□□□□□ -1.38
PTCD3-208ENST00000469585 TUBP50607 506 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 NTHL1P78549 312 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ZXDAP98168 799 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 TUBB3Q13509 450 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 GOLGA7BQ2TAP0 167 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 PLA1AQ53H76 456 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 FAM209BQ5JX69 171 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 RBM20Q5T481 1227 aaKnown RBP6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ZNF852Q6ZMS4 543 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 MON1AQ86VX9 555 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ARID3BQ8IVW6 561 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-208ENST00000469585 CMTM8Q8IZV2 173 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 CCDC33Q8N5R6 958 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ANKRD52Q8NB46 1076 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ATP11CQ8NB49 1132 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ITFG1Q8TB96 612 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 PROKR1Q8TCW9 393 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 BPIFB1Q8TDL5 484 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ASB10Q8WXI3 467 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 PMM1Q92871 262 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 DNASE1L2Q92874 299 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ATP2A3Q93084 1043 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 MYADMQ96S97 322 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 NELL2Q99435 816 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 KXD1Q9BQD3 176 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 RTP3Q9BQQ7 232 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 VPS16Q9H269 839 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 DPEP3Q9H4B8 488 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 C8orf33Q9H7E9 229 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-208ENST00000469585 APOBEC3GQ9HC16 384 aaKnown RBP6.45□□□□□ -1.38
PTCD3-208ENST00000469585 SERHLQ9NQF3 203 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 SEPT11Q9NVA2 429 aaKnown RBP6.45□□□□□ -1.38
PTCD3-208ENST00000469585 TAB2Q9NYJ8 693 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 TBC1D14Q9P2M4 693 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 WNT16Q9UBV4 365 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 SLC12A6Q9UHW9 1150 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 MYRFQ9Y2G1 1151 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 ZNF510Q9Y2H8 683 aa6.45□□□□□ -1.38
PTCD3-208ENST00000469585 TCF20Q9UGU0 1960 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms