RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PRPF39Q86UA1 669 aaKnown RBP5.13□□□□□ -1.59
LSM5-209ENST00000468872 AADATQ8N5Z0 425 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 NEXN-AS1Q8NBZ9 246 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 THOC3Q96J01 351 aaKnown RBP5.13□□□□□ -1.59
LSM5-209ENST00000468872 EGLN2Q96KS0 407 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 HARBI1Q96MB7 349 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 GAD1Q99259 594 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 HAUS8Q9BT25 410 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 TEX12Q9BXU0 123 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 PPP1R3EQ9H7J1 279 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 MRPL44Q9H9J2 332 aaKnown RBP5.13□□□□□ -1.59
LSM5-209ENST00000468872 LTB4R2Q9NPC1 389 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 PAG1Q9NWQ8 432 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 MTMR10Q9NXD2 777 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 PADI1Q9ULC6 663 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 PTRH2Q9Y3E5 179 aaKnown RBP5.13□□□□□ -1.59
LSM5-209ENST00000468872 CMAHPQ9Y471 501 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 ARHGEF40Q8TER5 1519 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 A0A1B0GVM2 712 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 RPS10-NUDT3A0A1W2PQS6 291 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 TCERG1O14776 1098 aaKnown RBP5.12□□□□□ -1.59
LSM5-209ENST00000468872 HSPA12AO43301 675 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 RGS14O43566 566 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 DAB1O75553 588 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 T-ENOLP0DO92 83 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 ANXA7P20073 488 aaKnown RBP5.12□□□□□ -1.59
LSM5-209ENST00000468872 RRM1P23921 792 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 HNRNPH1P31943 449 aaKnown RBP5.12□□□□□ -1.59
LSM5-209ENST00000468872 MRPS34P82930 218 aaKnown RBP5.12□□□□□ -1.59
LSM5-209ENST00000468872 LRMPQ12912 555 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 EFNB3Q15768 340 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 NTRK2Q16620 822 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 BMP2KLQ5H9B9 411 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 DNTTIP2Q5QJE6 756 aaKnown RBP5.12□□□□□ -1.59
LSM5-209ENST00000468872 FNBP1LQ5T0N5 605 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 OTUD1Q5VV17 481 aaPredicted RBP5.12□□□□□ -1.59
LSM5-209ENST00000468872 GGNBP1Q5YKI7 109 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 SIGIRRQ6IA17 410 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 METTL2BQ6P1Q9 378 aaKnown RBP5.12□□□□□ -1.59
LSM5-209ENST00000468872 KRBA2Q6ZNG9 492 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 KBTBD6Q86V97 674 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 OR8K5Q8NH50 307 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 ASB5Q8WWX0 329 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 CCDC34Q96HJ3 373 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 METTL2AQ96IZ6 378 aaKnown RBP5.12□□□□□ -1.59
LSM5-209ENST00000468872 TXLNGYQ9BZA5 131 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 HRH4Q9H3N8 390 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 PIGMQ9H3S5 423 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 MMP25Q9NPA2 562 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 MRPL15Q9P015 296 aaKnown RBP5.12□□□□□ -1.59
LSM5-209ENST00000468872 IL36RNQ9UBH0 155 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 SLC9A2Q9UBY0 812 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 CDC14AQ9UNH5 594 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 INSL5Q9Y5Q6 135 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 CCDC180Q9P1Z9 1646 aa5.12□□□□□ -1.59
LSM5-209ENST00000468872 IGHV4-28A0A0C4DH34 117 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 A0A1B0GVT2 93 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 VWA5AO00534 786 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 TNFRSF13BO14836 293 aaPredicted RBP5.11□□□□□ -1.59
LSM5-209ENST00000468872 OGG1O15527 345 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 SPRY3O43610 288 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 ZIC3O60481 467 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 MITFO75030 526 aaPredicted RBP5.11□□□□□ -1.59
LSM5-209ENST00000468872 SAT1P21673 171 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 HOXC9P31274 260 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 PRCPP42785 496 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 MRPS5P82675 430 aaKnown RBP5.11□□□□□ -1.59
LSM5-209ENST00000468872 GPS2Q13227 327 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 GARNL3Q5VVW2 1013 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 SLC30A6Q6NXT4 461 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 KRT74Q7RTS7 529 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 AACSQ86V21 672 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 FOXRED2Q8IWF2 684 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 HACE1Q8IYU2 909 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 B4GALNT2Q8NHY0 566 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 TRPC4APQ8TEL6 797 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 PRPF31Q8WWY3 499 aaKnown RBP5.11□□□□□ -1.59
LSM5-209ENST00000468872 ABHD1Q96SE0 405 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 PAFAH2Q99487 392 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 ACSS1Q9NUB1 689 aaPredicted RBP5.11□□□□□ -1.59
LSM5-209ENST00000468872 GIMAP4Q9NUV9 329 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 COPG2Q9UBF2 871 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 MORF4L1Q9UBU8 362 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 FBXW11Q9UKB1 542 aa5.11□□□□□ -1.59
LSM5-209ENST00000468872 GLOD5A6NK44 160 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 INAFM1C9JVW0 142 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 PRR23D1E9PI22 279 aaPredicted RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 ADAMDEC1O15204 470 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 ZNF500O60304 480 aaPredicted RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 ICAM1P05362 532 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 PRR23D2P0DMB1 279 aaPredicted RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 ACTN1P12814 892 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 DDX5P17844 614 aaKnown RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 RPL3P39023 403 aaKnown RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 RFX2P48378 723 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 MXI1P50539 228 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 SUOXP51687 545 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 GPR143P51810 404 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 NUDT6P53370 316 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 RAD23BP54727 409 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms