RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 ZDHHC1Q8WTX9 485 aa18.98■□□□□ 0.63
COL7A1-207ENST00000467985 CCDC97Q96F63 343 aaPredicted RBP18.98■□□□□ 0.63
COL7A1-207ENST00000467985 COX14Q96I36 57 aa18.98■□□□□ 0.63
COL7A1-207ENST00000467985 CALR3Q96L12 384 aaKnown RBP18.98■□□□□ 0.63
COL7A1-207ENST00000467985 AGAP3Q96P47 875 aa18.98■□□□□ 0.63
COL7A1-207ENST00000467985 DPH1Q9BZG8 443 aa18.98■□□□□ 0.63
COL7A1-207ENST00000467985 FAM83DQ9H4H8 585 aa18.98■□□□□ 0.63
COL7A1-207ENST00000467985 SPATS2LQ9NUQ6 558 aaKnown RBP18.98■□□□□ 0.63
COL7A1-207ENST00000467985 SEPT10Q9P0V9 454 aa18.98■□□□□ 0.63
COL7A1-207ENST00000467985 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.98■□□□□ 0.63
COL7A1-207ENST00000467985 HYOU1Q9Y4L1 999 aa18.98■□□□□ 0.63
COL7A1-207ENST00000467985 RNF215Q9Y6U7 377 aa18.98■□□□□ 0.63
COL7A1-207ENST00000467985 ARHGEF17Q96PE2 2063 aaPredicted RBP18.97■□□□□ 0.63
COL7A1-207ENST00000467985 A0A0A6YYK5 440 aaPredicted RBP18.97■□□□□ 0.63
COL7A1-207ENST00000467985 A0A1W2PNU3 283 aaPredicted RBP18.97■□□□□ 0.63
COL7A1-207ENST00000467985 A0A1W2PQM1 296 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 MTSS1O43312 755 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 CCKBRP32239 447 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 SPINT3P49223 89 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 UCNP55089 124 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 INHBCP55103 352 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 BROXQ5VW32 411 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 C11orf63Q6NUN7 778 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 SLC30A9Q6PML9 568 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 GALNT13Q8IUC8 556 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 SPACA3Q8IXA5 215 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 KATNAL2Q8IYT4 538 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 OR2M4Q96R27 311 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 PANX2Q96RD6 677 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 SRPK1Q96SB4 655 aaKnown RBP18.97■□□□□ 0.63
COL7A1-207ENST00000467985 EPB41L5Q9HCM4 733 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 RAD18Q9NS91 495 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 VPS18Q9P253 973 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 TMEM98Q9Y2Y6 226 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 PCDHA13Q9Y5I0 950 aa18.97■□□□□ 0.63
COL7A1-207ENST00000467985 RHPN2P1A8MT19 583 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 CASC3O15234 703 aaKnown RBP18.96■□□□□ 0.63
COL7A1-207ENST00000467985 ZRANB2O95218 330 aaKnown RBP eCLIP18.96■□□□□ 0.63
COL7A1-207ENST00000467985 ITGA2BP08514 1039 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 TLE3Q04726 772 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 CDK18Q07002 472 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 BIRC2Q13490 618 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 PRKD1Q15139 912 aaPredicted RBP18.96■□□□□ 0.63
COL7A1-207ENST00000467985 CLPPQ16740 277 aaPredicted RBP18.96■□□□□ 0.63
COL7A1-207ENST00000467985 PYCR3Q53H96 274 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 TEX44Q53QW1 395 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 TFDP3Q5H9I0 405 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 CCDC70Q6NSX1 233 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 SPOCD1Q6ZMY3 1216 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 ZNF438Q7Z4V0 828 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 RCOR2Q8IZ40 523 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 PTCD2Q8WV60 388 aaKnown RBP18.96■□□□□ 0.63
COL7A1-207ENST00000467985 TFB1MQ8WVM0 346 aaKnown RBP18.96■□□□□ 0.63
COL7A1-207ENST00000467985 KCNE4Q8WWG9 221 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 TMEM159Q96B96 161 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 PRR11Q96HE9 360 aaPredicted RBP18.96■□□□□ 0.63
COL7A1-207ENST00000467985 TRIB3Q96RU7 358 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 AGAP2Q99490 1192 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 CEP41Q9BYV8 373 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 PRORYQ9H606 182 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 ZFYVE1Q9HBF4 777 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 GLOD4Q9HC38 313 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 MAGEE1Q9HCI5 957 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 ATMQ13315 3056 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 UNC13CQ8NB66 2214 aa18.96■□□□□ 0.63
COL7A1-207ENST00000467985 CDRT15L2A8MXV6 281 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 PLD2O14939 933 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 CST8O60676 142 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 TNFSF15O95150 251 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 IPO7O95373 1038 aaKnown RBP18.95■□□□□ 0.62
COL7A1-207ENST00000467985 AK4P27144 223 aaPredicted RBP18.95■□□□□ 0.62
COL7A1-207ENST00000467985 ACTR1BP42025 376 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 GPR3P46089 330 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 ACTR1AP61163 376 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 GALNT3Q14435 633 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 HENMT1Q5T8I9 393 aaKnown RBP18.95■□□□□ 0.62
COL7A1-207ENST00000467985 FOXR1Q6PIV2 292 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 RAB11FIP2Q7L804 512 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 B3GNT8Q7Z7M8 397 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 CLEC14AQ86T13 490 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 TRIM74Q86UV6 250 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 SFTPA2Q8IWL1 248 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 FBXO39Q8N4B4 442 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 P3H4Q92791 437 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 TADA1Q96BN2 335 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 RBM41Q96IZ5 413 aaKnown RBP18.95■□□□□ 0.62
COL7A1-207ENST00000467985 FOXP3Q9BZS1 431 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 RMI1Q9H9A7 625 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 IMPACTQ9P2X3 320 aa18.95■□□□□ 0.62
COL7A1-207ENST00000467985 KIF26BQ2KJY2 2108 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 INPP4BO15327 924 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 ASMTLO95671 621 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 ECEL1O95672 775 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 MAZP56270 477 aaKnown RBP18.94■□□□□ 0.62
COL7A1-207ENST00000467985 DCDC1P59894 354 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 B4GALNT1Q00973 533 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 NR1D2Q14995 579 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 KAZNQ674X7 775 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 MARK2Q7KZI7 788 aaKnown RBP18.94■□□□□ 0.62
COL7A1-207ENST00000467985 LYSMD3Q7Z3D4 306 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms