RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 A0A0B4J269 797 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 CCDC154A6NI56 674 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 H0YCG3 227 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 IKBKBO14920 756 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 NPC1O15118 1278 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 SGTAO43765 313 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 HUS1O60921 280 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 PIGRP01833 764 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 OR52Z1P0C646 297 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 ACADMP11310 421 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 TYRP14679 529 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 ABCB4P21439 1286 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 ACAT1P24752 427 aaKnown RBP4.31□□□□□ -1.72
SSR3-204ENST00000467733 CD27P26842 260 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 ANXA13P27216 316 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 PSMA5P28066 241 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 EPHA8P29322 1005 aaPredicted RBP4.31□□□□□ -1.72
SSR3-204ENST00000467733 SLC6A9P48067 706 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 COPAP53621 1224 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 RIPPLY3P57055 190 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 C21orf59P57076 290 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 STK3Q13188 491 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 ORC2Q13416 577 aaPredicted RBP4.31□□□□□ -1.72
SSR3-204ENST00000467733 MTM1Q13496 603 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 ENPP2Q13822 863 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 AGAP9Q5VTM2 703 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 RINT1Q6NUQ1 792 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 KDM7AQ6ZMT4 941 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 Q6ZNX1 250 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 C4orf50Q6ZRC1 276 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 SEM1Q6ZVN7 128 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 C1orf186Q6ZWK4 172 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 C1QL2Q7Z5L3 287 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 CACUL1Q86Y37 369 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 TMEM25Q86YD3 366 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 EXD3Q8N9H8 876 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 C9orf106Q8NAJ2 232 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 NLGN4YQ8NFZ3 816 aaPredicted RBP4.31□□□□□ -1.72
SSR3-204ENST00000467733 SAP25Q8TEE9 199 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 PRCCQ92733 491 aaPredicted RBP4.31□□□□□ -1.72
SSR3-204ENST00000467733 MYLPFQ96A32 169 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 VCPIP1Q96JH7 1222 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 TMX3Q96JJ7 454 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 SLITRK1Q96PX8 696 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 XPO6Q96QU8 1125 aaKnown RBP4.31□□□□□ -1.72
SSR3-204ENST00000467733 MMS19Q96T76 1030 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.31□□□□□ -1.72
SSR3-204ENST00000467733 MSTO1Q9BUK6 570 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 ASB7Q9H672 318 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 C6orf106Q9H6K1 298 aaPredicted RBP4.31□□□□□ -1.72
SSR3-204ENST00000467733 ASCL3Q9NQ33 180 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 AASDHPPTQ9NRN7 309 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 THSD1Q9NS62 852 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 DDX19AQ9NUU7 478 aaKnown RBP4.31□□□□□ -1.72
SSR3-204ENST00000467733 DPP3Q9NY33 737 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 LRIT1Q9P2V4 623 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 LRWD1Q9UFC0 647 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.31□□□□□ -1.72
SSR3-204ENST00000467733 CPSF3Q9UKF6 684 aaKnown RBP4.31□□□□□ -1.72
SSR3-204ENST00000467733 GTF3C4Q9UKN8 822 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 PCDHB1Q9Y5F3 818 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 NOX1Q9Y5S8 564 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 ACTL7AQ9Y615 435 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 CFAP20Q9Y6A4 193 aaKnown RBP4.31□□□□□ -1.72
SSR3-204ENST00000467733 STON1Q9Y6Q2 735 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 DRGXA6NNA5 263 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 WASH3PC4AMC7 463 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 NEDD8-MDP1E9PL57 170 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 VILLO15195 856 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 COCHO43405 550 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 HTRA2O43464 458 aaPredicted RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 SYNCRIPO60506 623 aaKnown RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 TSPAN3O60637 253 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 ZFPL1O95159 310 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 SEMA4FO95754 770 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 IL33O95760 270 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 MT-CO3P00414 261 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 IRF1P10914 325 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 MTHFD1P11586 935 aaKnown RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 MYF5P13349 255 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 CKMT2P17540 419 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 FPR1P21462 350 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 SCP2P22307 547 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 BDNFP23560 247 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 ACP1P24666 158 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 ACSL1P33121 698 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 LHX1P48742 406 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 TUBP50607 506 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 NEK2P51955 445 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 CHN2P52757 468 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 BCAT1P54687 386 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 CTXN1P60606 82 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 PSMC1P62191 440 aaKnown RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 ASIC1P78348 528 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 E2F1Q01094 437 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 POU5F1Q01860 360 aaKnown RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 TLE1Q04724 770 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 TAF10Q12962 218 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 RAB39AQ14964 217 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 E2F5Q15329 346 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms