RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 RAD54LQ92698 747 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 NAT6Q93015 286 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 TTC17Q96AE7 1141 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 TMEM159Q96B96 161 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 FOXRED1Q96CU9 486 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-207ENST00000467273 SAAL1Q96ER3 474 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 SMOQ99835 787 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 LLPHQ9BRT6 129 aaKnown RBP5.57□□□□□ -1.52
PTCD3-207ENST00000467273 FUCA2Q9BTY2 467 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 MRPL44Q9H9J2 332 aaKnown RBP5.57□□□□□ -1.52
PTCD3-207ENST00000467273 BLOC1S4Q9NUP1 217 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 ABCB8Q9NUT2 735 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 OSER1Q9NX31 292 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 SERGEFQ9UGK8 458 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 CYTH4Q9UIA0 394 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 GGA2Q9UJY4 613 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 ACAD8Q9UKU7 415 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 ICE1Q9Y2F5 2266 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 NF1P21359 2839 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 NYNRINQ9P2P1 1898 aaKnown RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 ITIH6Q6UXX5 1313 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TBC1D3DA0A087WVF3 549 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TBC1D3IA0A087WXS9 549 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TBC1D3EA0A087X179 549 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TBC1D3KA0A087X1G2 549 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 LY6G6EA0A0G2JKS1 128 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 EDDM13A0A1B0GTR0 161 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 EME2A4GXA9 379 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 VWA3AA6NCI4 1184 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TBC1D3FA6NER0 549 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TBC1D3LB9A6J9 549 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 HHLA1C9JL84 531 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TPP1O14773 563 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 IRAK2O43187 625 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 PLRG1O43660 514 aaKnown RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 STX6O43752 255 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 SDC3O75056 442 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 SRPRAP08240 638 aaKnown RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 CLEC2LP0C7M8 214 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TBC1D3HP0C7X1 549 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 P4HA1P13674 534 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TGM2P21980 687 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 SLC5A2P31639 672 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 CLK1P49759 484 aaKnown RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 MAP3K7CLP57077 242 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 ZNF177Q13360 481 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TRPC3Q13507 836 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 ELAVL3Q14576 367 aaKnown RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 CT83Q5H943 113 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 MANEAQ5SRI9 462 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 C9orf64Q5T6V5 341 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TBC1D3GQ6DHY5 549 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TBC1D3CQ6IPX1 549 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 ERAP2Q6P179 960 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 NEK5Q6P3R8 708 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 STXBP4Q6ZWJ1 553 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 CENPQQ7L2Z9 268 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 STK32CQ86UX6 486 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 UNC93AQ86WB7 457 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 CXorf67Q86X51 503 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 SFR1Q86XK3 245 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 DENND1CQ8IV53 801 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 HSCBQ8IWL3 235 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TBC1D3Q8IZP1 549 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 AADATQ8N5Z0 425 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 ZNF366Q8N895 744 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TMA16Q96EY4 203 aaKnown RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 LCORQ96JN0 433 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 CATSPER2Q96P56 530 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 PLIN2Q99541 437 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 CBWD1Q9BRT8 395 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 STRADBQ9C0K7 418 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 DNAI2Q9GZS0 605 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 POFUT1Q9H488 388 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 NMUR1Q9HB89 426 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 PREBQ9HCU5 417 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 OLA1Q9NTK5 396 aaKnown RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 CCM2LQ9NUG4 571 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 UCKL1Q9NWZ5 548 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 DTLQ9NZJ0 730 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 C11orf21Q9P2W6 132 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 TAGLN3Q9UI15 199 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 FBXO2Q9UK22 296 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 CLEC4EQ9ULY5 219 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 HBS1LQ9Y450 684 aaKnown RBP5.56□□□□□ -1.52
PTCD3-207ENST00000467273 U3KQA8 63 aa5.56□□□□□ -1.52
PTCD3-207ENST00000467273 LRRK1Q38SD2 2015 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 SETD2Q9BYW2 2564 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-207ENST00000467273 UBA6A0AVT1 1052 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-207ENST00000467273 GOLGA6L22H0YM25 854 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 DDX3XO00571 662 aaKnown RBP eCLIP5.55□□□□□ -1.52
PTCD3-207ENST00000467273 MDM4O15151 490 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 FFAR2O15552 330 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 DTNBO60941 627 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 BEST1O76090 585 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 GCNT3O95395 438 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 DDAH2O95865 285 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 BMP15O95972 392 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 RPN1P04843 607 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms