RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ZWINTO95229 277 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 IVLP07476 585 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 MMP12P39900 470 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 DGKQP52824 942 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 GSDMDP57764 484 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 YWHAEP62258 255 aaKnown RBP12.47□□□□□ -0.41
UBR4-210ENST00000466969 GNA12Q03113 381 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 GPS2Q13227 327 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 ZNF324BQ6AW86 544 aaPredicted RBP12.47□□□□□ -0.41
UBR4-210ENST00000466969 RPUSD3Q6P087 351 aaKnown RBP12.47□□□□□ -0.41
UBR4-210ENST00000466969 SIDT2Q8NBJ9 832 aaKnown RBP12.47□□□□□ -0.41
UBR4-210ENST00000466969 WFDC11Q8NEX6 87 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 NCAPGQ9BPX3 1015 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 MLPHQ9BV36 600 aaPredicted RBP12.47□□□□□ -0.41
UBR4-210ENST00000466969 ZNF395Q9H8N7 513 aaPredicted RBP12.47□□□□□ -0.41
UBR4-210ENST00000466969 NDFIP2Q9NV92 336 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.47□□□□□ -0.41
UBR4-210ENST00000466969 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 LILRA5A6NI73 299 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 SCRG1O75711 98 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 IGSF6O95976 241 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 ELFN1P0C7U0 828 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 TYRP1P17643 537 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 AMD1P17707 334 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 NELFEP18615 380 aaKnown RBP12.46□□□□□ -0.41
UBR4-210ENST00000466969 POLD2P49005 469 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 ACY1Q03154 408 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 PPP3CAQ08209 521 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 NME3Q13232 169 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 PRSS42Q7Z5A4 293 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 MRGPREQ86SM8 312 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 TMEM126BQ8IUX1 230 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 HCAR2Q8TDS4 363 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 CA5BP1Q8WTZ4 195 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
UBR4-210ENST00000466969 KLHL6Q8WZ60 621 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 TTYH3Q9C0H2 523 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 TMEM8AQ9HCN3 771 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 SEC14L3Q9UDX4 400 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 HPCAL4Q9UM19 191 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 LIMCH1Q9UPQ0 1083 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.41
UBR4-210ENST00000466969 UBXN7O94888 489 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 EML2O95834 649 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
UBR4-210ENST00000466969 SLC2A4P14672 509 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 ETFBP38117 255 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 ACADSBP45954 432 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 STILQ15468 1287 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 CNGA2Q16280 664 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 DOK6Q6PKX4 331 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 TECPR1Q7Z6L1 1165 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 PELI3Q8N2H9 469 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 AVL9Q8NBF6 648 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 ACRBPQ8NEB7 543 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 TMEM158Q8WZ71 300 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 MED15Q96RN5 788 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 TEX101Q9BY14 249 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 TNMDQ9H2S6 317 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 EPS8L2Q9H6S3 715 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 SLC39A2Q9NP94 309 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 ATP13A2Q9NQ11 1180 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 DNAJB12Q9NXW2 375 aaKnown RBP12.45□□□□□ -0.42
UBR4-210ENST00000466969 SLC17A4Q9Y2C5 497 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 PLEKHA6Q9Y2H5 1048 aa12.45□□□□□ -0.42
UBR4-210ENST00000466969 TLCD2A6NGC4 264 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 INAFM1C9JVW0 142 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 MEN1O00255 615 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 KIF1CO43896 1103 aaKnown RBP12.44□□□□□ -0.42
UBR4-210ENST00000466969 PIGNO95427 931 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 KRT13P13646 458 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 FOLR1P15328 257 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 SOX8P57073 446 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 CDK3Q00526 305 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 AMPD3Q01432 767 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 LRP8Q14114 963 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 ACOX1Q15067 660 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 KRT39Q6A163 491 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 IYDQ6PHW0 289 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 LIPIQ6XZB0 460 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 LEKR1Q6ZMV7 388 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 SPOCD1Q6ZMY3 1216 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 ADAMTS18Q8TE60 1221 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 TFAP2BQ92481 460 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 SEMA4DQ92854 862 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 ZDHHC12Q96GR4 267 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 THAP9Q9H5L6 903 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 RAB20Q9NX57 234 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 OGFRQ9NZT2 677 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 KCNN3Q9UGI6 736 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 PADI2Q9Y2J8 665 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 MFHAS1Q9Y4C4 1052 aa12.44□□□□□ -0.42
UBR4-210ENST00000466969 H3BQV1 296 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 PROM1O43490 865 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 SLC19A2O60779 497 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 NR3C1P04150 777 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 ACVRL1P37023 503 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 SCNN1AP37088 669 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 MYBPHQ13203 477 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 CUL2Q13617 745 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms