RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 OAS3Q9Y6K5 1087 aaKnown RBP11.6□□□□□ -0.55
CUX1-207ENST00000465461 DNAH14Q0VDD8 3507 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 CABIN1Q9Y6J0 2220 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 MYLKQ15746 1914 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 DMXL1Q9Y485 3027 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 TCRBV7S3A2A0A539 114 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 CTAGE9A4FU28 777 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 E7EVH7 732 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 H3BM21 787 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 PDE2AO00408 941 aaPredicted RBP11.59□□□□□ -0.55
CUX1-207ENST00000465461 TOR1BO14657 336 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 YKT6O15498 198 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 AQP9O43315 295 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 SIGLEC6O43699 453 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 UGT1A9O60656 530 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 MTX2O75431 263 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 ASMTLO95671 621 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 TNFP01375 233 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 KRT14P02533 472 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 CEACAM5P06731 702 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 TCP1P17987 556 aaKnown RBP11.59□□□□□ -0.55
CUX1-207ENST00000465461 UGT1A6P19224 532 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 CSRP1P21291 193 aaKnown RBP11.59□□□□□ -0.55
CUX1-207ENST00000465461 UGT1A1P22309 533 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 UGT1A4P22310 534 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 UGT1A3P35503 534 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 UGT1A5P35504 534 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 HMGCLP35914 325 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 FDFT1P37268 417 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 GRK6P43250 576 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 HK3P52790 923 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 HNRNPKP61978 463 aaKnown RBP eCLIP11.59□□□□□ -0.55
CUX1-207ENST00000465461 BASP1P80723 227 aaKnown RBP11.59□□□□□ -0.55
CUX1-207ENST00000465461 DNAJC3Q13217 504 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 TRIP6Q15654 476 aaKnown RBP11.59□□□□□ -0.55
CUX1-207ENST00000465461 CCDC157Q569K6 752 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 N4BP2L1Q5TBK1 243 aaPredicted RBP11.59□□□□□ -0.55
CUX1-207ENST00000465461 CCDC137Q6PK04 289 aaKnown RBP11.59□□□□□ -0.55
CUX1-207ENST00000465461 FAM151BQ6UXP7 276 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 ADAMTSL4Q6UY14 1074 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 SYT10Q6XYQ8 523 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 CREG2Q8IUH2 290 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 PNPLA1Q8N8W4 532 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 OR4K2Q8NGD2 314 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 OR13C4Q8NGS5 318 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 ATL2Q8NHH9 583 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 BAHD1Q8TBE0 780 aaPredicted RBP11.59□□□□□ -0.55
CUX1-207ENST00000465461 HIC2Q96JB3 615 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 SLC13A1Q9BZW2 595 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 TMEM168Q9H0V1 697 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 LRRC40Q9H9A6 602 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 UGT1A7Q9HAW7 530 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 UGT1A10Q9HAW8 530 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 UGT1A8Q9HAW9 530 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 HOMER3Q9NSC5 361 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 KCTD5Q9NXV2 234 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 IL17CQ9P0M4 197 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 TMPRSS11EQ9UL52 423 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 SUFUQ9UMX1 484 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 PRKAB1Q9Y478 270 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 SAR1BQ9Y6B6 198 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 SCN8AQ9UQD0 1980 aa11.59□□□□□ -0.55
CUX1-207ENST00000465461 LRP4O75096 1905 aa11.58□□□□□ -0.55
CUX1-207ENST00000465461 PRSS38A1L453 326 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 RGSL1A5PLK6 1076 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 CES2O00748 559 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 STX7O15400 261 aaKnown RBP11.58□□□□□ -0.56
CUX1-207ENST00000465461 PSMD3O43242 534 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 PHF2O75151 1096 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 APRTP07741 180 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 HOXC4P09017 264 aaPredicted RBP11.58□□□□□ -0.56
CUX1-207ENST00000465461 CEACAM1P13688 526 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 CTSEP14091 401 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 CASQ1P31415 396 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 GNPDA1P46926 289 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 SIM1P81133 766 aaPredicted RBP11.58□□□□□ -0.56
CUX1-207ENST00000465461 GPS1Q13098 491 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 SEMA5AQ13591 1074 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 SEPT6Q14141 434 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 POU6F1Q14863 301 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 TAF1AQ15573 450 aaPredicted RBP11.58□□□□□ -0.56
CUX1-207ENST00000465461 CHRNA6Q15825 494 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 CYP1B1Q16678 543 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 CCDC38Q502W7 563 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 CERCAMQ5T4B2 595 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 PPP1R21Q6ZMI0 780 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 NLRP8Q86W28 1048 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 SFTPA2Q8IWL1 248 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 TRAM1L1Q8N609 369 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 NAT14Q8WUY8 206 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 BTN2A2Q8WVV5 523 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 COX14Q96I36 57 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 CNDP2Q96KP4 475 aaKnown RBP11.58□□□□□ -0.56
CUX1-207ENST00000465461 PPP1R2P1Q96PQ5 205 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 SRPK1Q96SB4 655 aaKnown RBP11.58□□□□□ -0.56
CUX1-207ENST00000465461 NAP1L3Q99457 506 aaPredicted RBP11.58□□□□□ -0.56
CUX1-207ENST00000465461 FRMD8Q9BZ67 464 aaPredicted RBP11.58□□□□□ -0.56
CUX1-207ENST00000465461 DDX47Q9H0S4 455 aaKnown RBP11.58□□□□□ -0.56
CUX1-207ENST00000465461 TRABDQ9H4I3 376 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 FAM96AQ9H5X1 160 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms