RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FAM86C2PA6NEL3 165 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 C2orf81A6NN90 581 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 H0Y858 1186 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 AXIN1O15169 862 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 KRT37O76014 449 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 PCDH8O95206 1070 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 SLC4A1P02730 911 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 MT-ND3P03897 115 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 TDGF1P13385 188 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 ZNF30P17039 623 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 PGAM1P18669 254 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 LPOP22079 712 aaPredicted RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 SERPINB9P50453 376 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 STC1P52823 247 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 SLC18A2Q05940 514 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 FRG1Q14331 258 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 ITIH4Q14624 930 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 MAP7D1Q3KQU3 841 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 ARMC3Q5W041 872 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 CES3Q6UWW8 571 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 FRMD1Q8N878 549 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 BANPQ8N9N5 519 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 CCDC197Q8NCU1 140 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 PTCD2Q8WV60 388 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 MRRFQ96E11 262 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 SGK2Q9HBY8 427 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 MRM3Q9HC36 420 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 WSB2Q9NYS7 404 aaPredicted RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 IL17CQ9P0M4 197 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 SAMD15Q9P1V8 674 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 FAM237BA0A1B0GVD1 139 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 TCP11X1B4DZS4 312 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 MMP20O60882 483 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 SPAG7O75391 227 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 SNRPAP09012 282 aaKnown RBP16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 C1SP09871 688 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 ELFN1P0C7U0 828 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 CNTFP26441 200 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 OXTRP30559 389 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 ZNF140P52738 457 aaPredicted RBP16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 LAMB3Q13751 1172 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 TSTD2Q5T7W7 516 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 SH2D5Q6ZV89 423 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 NLRP9Q7RTR0 991 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 HSD11B1LQ7Z5J1 315 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 TMEM135Q86UB9 458 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 TAX1BP1Q86VP1 789 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 C4orf33Q8N1A6 199 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 FAM160A2Q8N612 972 aaPredicted RBP16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 PPM1NQ8N819 430 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 ANKS4BQ8N8V4 417 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 OR4K2Q8NGD2 314 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 OR13C4Q8NGS5 318 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 MFSD3Q96ES6 412 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 TOE1Q96GM8 510 aaKnown RBP16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 KDM4CQ9H3R0 1056 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 PREBQ9HCU5 417 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 BPIFA1Q9NP55 256 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 SLC2A6Q9UGQ3 507 aa16.87■□□□□ 0.29
EXOSC3-203ENST00000465229 TBC1D3DA0A087WVF3 549 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 TBC1D3IA0A087WXS9 549 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 TBC1D3EA0A087X179 549 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 TBC1D3KA0A087X1G2 549 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 IGHV1OR15-9A0A0B4J2B8 117 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 CCDC163A0A0D9SF12 145 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 TBC1D3FA6NER0 549 aaPredicted RBP16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 GOLGA8CPA6NN73 597 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 TBC1D3LB9A6J9 549 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 STX7O15400 261 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 KRT38O76015 456 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 TBC1D3HP0C7X1 549 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 GM2AP17900 193 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 PSMA3P25788 255 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 NMBRP28336 390 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 CD6P30203 668 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 RPA3P35244 121 aaPredicted RBP16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 CORO7P57737 925 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 PDE1BQ01064 536 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 CSTF1Q05048 431 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 ANKRD20A4Q4UJ75 823 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 TBC1D3GQ6DHY5 549 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 TBC1D3CQ6IPX1 549 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 ESRP1Q6NXG1 681 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 NEK5Q6P3R8 708 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 RFLNAQ6ZTI6 216 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 TBC1D3Q8IZP1 549 aaPredicted RBP16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 CXorf40AQ8TE69 158 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 STYXQ8WUJ0 223 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 GRAMD1AQ96CP6 724 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 CABS1Q96KC9 395 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 FCRL3Q96P31 734 aaPredicted RBP16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 TREX1Q9NSU2 369 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 RIMKLBQ9ULI2 386 aa16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 ZFR2Q9UPR6 939 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-203ENST00000465229 PRR23AA6NEV1 266 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 IGLON5A6NGN9 336 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 PSMD11O00231 422 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 KIAA0754O94854 1291 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 C6P13671 934 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 TAC1P20366 129 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms