RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 COX14Q96I36 57 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 STRADBQ9C0K7 418 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 BRD8Q9H0E9 1235 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 GOLPH3Q9H4A6 298 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 PRORYQ9H606 182 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 PKD2L2Q9NZM6 624 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 ATXN7L1Q9ULK2 861 aaPredicted RBP25.72■■□□□ 1.71
U2AF1-206ENST00000464750 ST14Q9Y5Y6 855 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 LCA5LO95447 670 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 ACTR1BP42025 376 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 SPINT3P49223 89 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 ACTR1AP61163 376 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 TAZQ16635 292 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 SOWAHCQ53LP3 525 aaPredicted RBP25.71■■□□□ 1.71
U2AF1-206ENST00000464750 NT5DC3Q86UY8 548 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 C17orf82Q86X59 251 aaPredicted RBP25.71■■□□□ 1.71
U2AF1-206ENST00000464750 ARL14Q8N4G2 192 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 CCHCR1Q8TD31 782 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 TMEM74Q96NL1 305 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 FCRL3Q96P31 734 aaPredicted RBP25.71■■□□□ 1.71
U2AF1-206ENST00000464750 TRIB3Q96RU7 358 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 WDR24Q96S15 920 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 SLC25A51Q9H1U9 297 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 TFR2Q9UP52 801 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 PLEKHM1Q9Y4G2 1056 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 ALG6Q9Y672 507 aa25.71■■□□□ 1.71
U2AF1-206ENST00000464750 CDRT15L2A8MXV6 281 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 TMX2-CTNND1H3BSU7 103 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 TNFSF15O95150 251 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 ASMTLO95671 621 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 ECEL1O95672 775 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 CCKBRP32239 447 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 MLLT3P42568 568 aaPredicted RBP25.7■■□□□ 1.7
U2AF1-206ENST00000464750 EIF3IQ13347 325 aaKnown RBP25.7■■□□□ 1.7
U2AF1-206ENST00000464750 PEX6Q13608 980 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 TFDP2Q14188 446 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 LLGL1Q15334 1064 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 PCSK7Q16549 785 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 PYCR3Q53H96 274 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 HENMT1Q5T8I9 393 aaKnown RBP25.7■■□□□ 1.7
U2AF1-206ENST00000464750 KAZNQ674X7 775 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 SPOCD1Q6ZMY3 1216 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 LYSMD3Q7Z3D4 306 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 GALNT13Q8IUC8 556 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 PATE1Q8WXA2 126 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 SAE1Q9UBE0 346 aaPredicted RBP25.7■■□□□ 1.7
U2AF1-206ENST00000464750 PCDHA13Q9Y5I0 950 aa25.7■■□□□ 1.7
U2AF1-206ENST00000464750 PLD2O14939 933 aa25.69■■□□□ 1.7
U2AF1-206ENST00000464750 CST8O60676 142 aa25.69■■□□□ 1.7
U2AF1-206ENST00000464750 PECAM1P16284 738 aaPredicted RBP25.69■■□□□ 1.7
U2AF1-206ENST00000464750 PRKD1Q15139 912 aaPredicted RBP25.69■■□□□ 1.7
U2AF1-206ENST00000464750 BZW1Q7L1Q6 419 aaKnown RBP25.69■■□□□ 1.7
U2AF1-206ENST00000464750 RAB11FIP2Q7L804 512 aa25.69■■□□□ 1.7
U2AF1-206ENST00000464750 KDELC2Q7Z4H8 507 aa25.69■■□□□ 1.7
U2AF1-206ENST00000464750 ZNF438Q7Z4V0 828 aa25.69■■□□□ 1.7
U2AF1-206ENST00000464750 CCDC170Q8IYT3 715 aa25.69■■□□□ 1.7
U2AF1-206ENST00000464750 NAGSQ8N159 534 aa25.69■■□□□ 1.7
U2AF1-206ENST00000464750 FBXO39Q8N4B4 442 aa25.69■■□□□ 1.7
U2AF1-206ENST00000464750 FAM83DQ9H4H8 585 aa25.69■■□□□ 1.7
U2AF1-206ENST00000464750 RHPN2P1A8MT19 583 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 FADS2P1A8MWK0 482 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 ITGA2BP08514 1039 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 PTPN3P26045 913 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 CYLC1P35663 651 aaPredicted RBP25.68■■□□□ 1.7
U2AF1-206ENST00000464750 NR2C2P49116 596 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 B4GALNT1Q00973 533 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 BIRC2Q13490 618 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 SPA17Q15506 151 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 SLC14A2Q15849 920 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 MAP9Q49MG5 647 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 TEX44Q53QW1 395 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 CLEC14AQ86T13 490 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 TADA1Q96BN2 335 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 BBC3Q96PG8 261 aaPredicted RBP25.68■■□□□ 1.7
U2AF1-206ENST00000464750 GLOD4Q9HC38 313 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 LUC7LQ9NQ29 371 aaKnown RBP25.68■■□□□ 1.7
U2AF1-206ENST00000464750 VPS18Q9P253 973 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 CNOT6Q9ULM6 557 aaKnown RBP25.68■■□□□ 1.7
U2AF1-206ENST00000464750 OAS3Q9Y6K5 1087 aaKnown RBP25.68■■□□□ 1.7
U2AF1-206ENST00000464750 BPTFQ12830 3046 aa25.68■■□□□ 1.7
U2AF1-206ENST00000464750 A0A0A6YYK5 440 aaPredicted RBP25.67■■□□□ 1.7
U2AF1-206ENST00000464750 RGSL1A5PLK6 1076 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 KLK10O43240 276 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 MT-CYBP00156 380 aaPredicted RBP25.67■■□□□ 1.7
U2AF1-206ENST00000464750 SLC4A1P02730 911 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 ATP1A1P05023 1023 aaKnown RBP25.67■■□□□ 1.7
U2AF1-206ENST00000464750 PIRTP0C851 137 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 UGT1A5P35504 534 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 ATRXP46100 2492 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 MARCKSL1P49006 195 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 ZNF75DP51815 510 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 OR1D5P58170 312 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 CXADRP78310 365 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 CDK18Q07002 472 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 LRP8Q14114 963 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 NR1D2Q14995 579 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 TFDP3Q5H9I0 405 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 BROXQ5VW32 411 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 C11orf63Q6NUN7 778 aa25.67■■□□□ 1.7
U2AF1-206ENST00000464750 KATNAL2Q8IYT4 538 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms