RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ELNP15502 786 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 AOC1P19801 751 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 CRATP43155 626 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 RPS6KA3P51812 740 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ZNF280AP59817 542 aaPredicted RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 BROXQ5VW32 411 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 TTC23Q5W5X9 447 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 RELL1Q8IUW5 271 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ADHFE1Q8IWW8 467 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 PCSK9Q8NBP7 692 aaKnown RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 MCOLN3Q8TDD5 553 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 NACC2Q96BF6 587 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 EPB41L1Q9H4G0 881 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 AMBNQ9NP70 447 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ATXN10Q9UBB4 475 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.05□□□□□ -0.96
HPS4-208ENST00000464362 TBL1XO60907 577 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 MLYCDO95822 493 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 FGF1P05230 155 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 CAPN1P07384 714 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 CCNA2P20248 432 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 TTPAP49638 278 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 RPS24P62847 133 aaKnown RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 CREB5Q02930 508 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 LRRC73Q5JTD7 316 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 BRMS1LQ5PSV4 323 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 PAQR3Q6TCH7 311 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 TMEM132CQ8N3T6 1108 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 PANX1Q96RD7 426 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 TSEN34Q9BSV6 310 aaKnown RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 ATG10Q9H0Y0 220 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 SOX17Q9H6I2 414 aaPredicted RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 REEP1Q9H902 201 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 CACNA2D2Q9NY47 1150 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ADAMTS6Q9UKP5 1117 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 TMCC3Q9ULS5 477 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 OAZ3Q9UMX2 235 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 SAMHD1Q9Y3Z3 626 aaKnown RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 GMPPBQ9Y5P6 360 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 KIAA0100Q14667 2235 aaKnown RBP9.04□□□□□ -0.96
HPS4-208ENST00000464362 PNMA8CA0A1B0GUJ8 204 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 A8MT66 165 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 E7ESA3 106 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 H7C4K7 107 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 FOXD2O60548 495 aaPredicted RBP9.04□□□□□ -0.96
HPS4-208ENST00000464362 KRT75O95678 551 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 CCDC159P0C7I6 412 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 CCNCP24863 283 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 ST13P50502 369 aaKnown RBP9.04□□□□□ -0.96
HPS4-208ENST00000464362 INTS6LQ5JSJ4 861 aaKnown RBP9.04□□□□□ -0.96
HPS4-208ENST00000464362 HECTD3Q5T447 861 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 TRAF7Q6Q0C0 670 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 OR10A6Q8NH74 314 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 REXO5Q96IC2 774 aaKnown RBP9.04□□□□□ -0.96
HPS4-208ENST00000464362 CCDC28BQ9BUN5 200 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 ADI1Q9BV57 179 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 RAD21L1Q9H4I0 556 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 TEKT2Q9UIF3 430 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 FKBPLQ9UIM3 349 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 C3orf18Q9UK00 162 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 PCDHB8Q9UN66 801 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 CCDC162PA2VCL2 907 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 MEIS3P2A8K0S8 358 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 KLF11O14901 512 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 NOBOXO60393 691 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 NIPSNAP2O75323 286 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 ANXA5P08758 320 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 COL6A2P12110 1019 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 PRKAG1P54619 331 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 CASP9P55211 416 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 ABRQ12979 859 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 ITGA7Q13683 1181 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 HIST2H2ACQ16777 129 aaPredicted RBP9.04□□□□□ -0.96
HPS4-208ENST00000464362 HIST2H2AA3Q6FI13 130 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 DOK6Q6PKX4 331 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 TMEM74Q96NL1 305 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 BTBD9Q96Q07 612 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 TRMOQ9BU70 441 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 SLC25A51Q9H1U9 297 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 NMUR1Q9HB89 426 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 ZC4H2Q9NQZ6 224 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 EXD2Q9NVH0 621 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 DERAQ9Y315 318 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 SRCAPQ6ZRS2 3230 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 ENPP3O14638 875 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 SNAP91O60641 907 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 RTN3O95197 1032 aaPredicted RBP9.04□□□□□ -0.96
HPS4-208ENST00000464362 NADKO95544 446 aaPredicted RBP9.04□□□□□ -0.96
HPS4-208ENST00000464362 C1RP00736 705 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 ANXA6P08133 673 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 MTHFRP42898 656 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 GLUD2P49448 558 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 POLR2JP52435 117 aaKnown RBP9.04□□□□□ -0.96
HPS4-208ENST00000464362 DGKQP52824 942 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 XIAPP98170 497 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 CAMK2GQ13555 558 aaPredicted RBP9.04□□□□□ -0.96
HPS4-208ENST00000464362 RABL3Q5HYI8 236 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 PAGE2BQ5JRK9 111 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 AFTPHQ6ULP2 937 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 MAPK15Q8TD08 544 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms