RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 HACD3Q9P035 362 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 SPASTQ9UBP0 616 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 SNX12Q9UMY4 172 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 ST14Q9Y5Y6 855 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 OAS3Q9Y6K5 1087 aaKnown RBP17.59■□□□□ 0.41
VPS52-214ENST00000463486 H3BM21 787 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 PDE2AO00408 941 aaPredicted RBP17.58■□□□□ 0.4
VPS52-214ENST00000463486 GAPDHSO14556 408 aaPredicted RBP17.58■□□□□ 0.4
VPS52-214ENST00000463486 TPP1O14773 563 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 YY2O15391 372 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 FFAR2O15552 330 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 LDOC1O95751 146 aaPredicted RBP17.58■□□□□ 0.4
VPS52-214ENST00000463486 AP2A1O95782 977 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 PYGLP06737 847 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 FTH1P19P0C7X4 201 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 ZSCAN5DPP0CG00 497 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 KCNA4P22459 653 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 KELP23276 732 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 PMLP29590 882 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 RPL22P35268 128 aaKnown RBP17.58■□□□□ 0.4
VPS52-214ENST00000463486 DNAJC3Q13217 504 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 PTPRCAPQ14761 206 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 KCTD19Q17RG1 926 aaPredicted RBP17.58■□□□□ 0.4
VPS52-214ENST00000463486 TTC27Q6P3X3 843 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 RD3Q7Z3Z2 195 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 TRIM74Q86UV6 250 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 TAB3Q8N5C8 712 aaPredicted RBP17.58■□□□□ 0.4
VPS52-214ENST00000463486 PDCD7Q8N8D1 485 aaKnown RBP17.58■□□□□ 0.4
VPS52-214ENST00000463486 FAM181AQ8N9Y4 354 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 ATL2Q8NHH9 583 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 DTX3LQ8TDB6 740 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 BLOC1S5Q8TDH9 187 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 HIC2Q96JB3 615 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 CNDP2Q96KP4 475 aaKnown RBP17.58■□□□□ 0.4
VPS52-214ENST00000463486 SLC13A1Q9BZW2 595 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 ETNK1Q9HBU6 452 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 BPIFA1Q9NP55 256 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 FTSJ1Q9UET6 329 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 TMEM98Q9Y2Y6 226 aa17.58■□□□□ 0.4
VPS52-214ENST00000463486 PCYT1BQ9Y5K3 369 aaPredicted RBP17.58■□□□□ 0.4
VPS52-214ENST00000463486 ASPMQ8IZT6 3477 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 PRSS38A1L453 326 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 GOLGA6CA6NDK9 693 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 GOLGA6BA6NDN3 693 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 NEMP2A6NFY4 417 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 CES2O00748 559 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 ZNF185O15231 689 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 BUD23O43709 281 aaKnown RBP17.57■□□□□ 0.4
VPS52-214ENST00000463486 TOP3BO95985 862 aaKnown RBP17.57■□□□□ 0.4
VPS52-214ENST00000463486 TNFP01375 233 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 IFNB1P01574 187 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 GOLGA6DP0CG33 693 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 CA5AP35218 305 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 BLKP51451 505 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 SEMA5AQ13591 1074 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 CYP1B1Q16678 543 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 DEFB133Q30KQ1 61 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 NRROSQ86YC3 692 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 TRAM1L1Q8N609 369 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 PNPLA1Q8N8W4 532 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 ACTRT1Q8TDG2 376 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 PLEKHG4BQ96PX9 1271 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 BOCQ9BWV1 1114 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 TMEM168Q9H0V1 697 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 LRRC40Q9H9A6 602 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 CYP4F12Q9HCS2 524 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 HOMER3Q9NSC5 361 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 GOLGA6AQ9NYA3 693 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 KCTD3Q9Y597 815 aa17.57■□□□□ 0.4
VPS52-214ENST00000463486 INPP4BO15327 924 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 SUN1O94901 812 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 SLC4A1P02730 911 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 IVLP07476 585 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 MYF5P13349 255 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 CKMT2P17540 419 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 ACADVLP49748 655 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 TAF1AQ15573 450 aaPredicted RBP17.56■□□□□ 0.4
VPS52-214ENST00000463486 PAPD7Q5XG87 772 aaKnown RBP17.56■□□□□ 0.4
VPS52-214ENST00000463486 ALS2CLQ60I27 953 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 GLT6D1Q7Z4J2 308 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 RAB44Q7Z6P3 723 aaPredicted RBP17.56■□□□□ 0.4
VPS52-214ENST00000463486 FSTL5Q8N475 847 aaPredicted RBP17.56■□□□□ 0.4
VPS52-214ENST00000463486 CCL4L1Q8NHW4 92 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 BRSK1Q8TDC3 778 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 ADAMTS14Q8WXS8 1223 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 APOLD1Q96LR9 279 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 ZSCAN5AQ9BUG6 496 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 AP1M1Q9BXS5 423 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 RAD18Q9NS91 495 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 SUFUQ9UMX1 484 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 NEU2Q9Y3R4 380 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 ARL5AQ9Y689 179 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 FRYQ5TBA9 3013 aa17.56■□□□□ 0.4
VPS52-214ENST00000463486 ASXL3Q9C0F0 2248 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 PSMD3O43242 534 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 LDB2O43679 373 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 DNAJC6O75061 913 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 CKMT1AP12532 417 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 ACP1P24666 158 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 PSMA3P25788 255 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms