RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PELI3Q8N2H9 469 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 FBXL6Q8N531 539 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 TRAM1L1Q8N609 369 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 PNPLA1Q8N8W4 532 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 OR6P1Q8NGX9 317 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 OR2W6PQ8NHA6 318 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 SCG3Q8WXD2 468 aaKnown RBP14.28□□□□□ -0.12
COL6A1-202ENST00000463060 RLN3Q8WXF3 142 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 ZIM3Q96PE6 472 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 KLF6Q99612 283 aaPredicted RBP14.28□□□□□ -0.12
COL6A1-202ENST00000463060 VIPAS39Q9H9C1 493 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 SPATA6Q9NWH7 488 aaPredicted RBP14.28□□□□□ -0.12
COL6A1-202ENST00000463060 CYP8B1Q9UNU6 501 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 PLAAQ9Y263 795 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 PSAT1Q9Y617 370 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 EML5Q05BV3 1969 aa14.27□□□□□ -0.12
COL6A1-202ENST00000463060 GLYATL1P3A0A0U1RQE8 302 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 GOLGA8CPA6NN73 597 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 AXIN1O15169 862 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 LZTS3O60299 673 aaPredicted RBP14.27□□□□□ -0.13
COL6A1-202ENST00000463060 UGT1A9O60656 530 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 SASH3O75995 380 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 TM7SF2O76062 418 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 SEMA4FO95754 770 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 S1PR4O95977 384 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 AHSGP02765 367 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 UGT1A6P19224 532 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 UGT1A1P22309 533 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 UGT1A4P22310 534 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 UGT1A3P35503 534 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 UGT1A5P35504 534 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 CCR5P51681 352 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 PPP2CBP62714 309 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 PPP2CAP67775 309 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 CACNG1Q06432 222 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 NFATC2Q13469 925 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 EFTUD2Q15029 972 aaKnown RBP eCLIP14.27□□□□□ -0.131e-6■■■■■ 31.1
COL6A1-202ENST00000463060 RASA2Q15283 850 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 TYSND1Q2T9J0 566 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 WSCD2Q2TBF2 565 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 GPR33Q49SQ1 333 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 ATP13A5Q4VNC0 1218 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 ALS2CLQ60I27 953 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 PSAPL1Q6NUJ1 521 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 LRIG3Q6UXM1 1119 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 FAM151BQ6UXP7 276 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 SNX20Q7Z614 316 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 GALNT7Q86SF2 657 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 SLC26A11Q86WA9 606 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 LRRC6Q86X45 466 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 DENND6AQ8IWF6 608 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 DTWD2Q8NBA8 298 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 TP53I13Q8NBR0 393 aaPredicted RBP14.27□□□□□ -0.13
COL6A1-202ENST00000463060 C2CD4AQ8NCU7 369 aaPredicted RBP14.27□□□□□ -0.13
COL6A1-202ENST00000463060 ZNF398Q8TD17 642 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 SLC44A1Q8WWI5 657 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 NELL1Q92832 810 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 CENPTQ96BT3 561 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 TOE1Q96GM8 510 aaKnown RBP14.27□□□□□ -0.13
COL6A1-202ENST00000463060 LENG8Q96PV6 779 aaPredicted RBP14.27□□□□□ -0.13
COL6A1-202ENST00000463060 FAM167BQ9BTA0 163 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 RIOK2Q9BVS4 552 aaKnown RBP14.27□□□□□ -0.13
COL6A1-202ENST00000463060 SLC17A9Q9BYT1 436 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 UGT1A7Q9HAW7 530 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 UGT1A10Q9HAW8 530 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 UGT1A8Q9HAW9 530 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 IARS2Q9NSE4 1012 aaKnown RBP14.27□□□□□ -0.13
COL6A1-202ENST00000463060 CATSPERZQ9NTU4 200 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 SMOXQ9NWM0 555 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 EURLQ9NYK6 297 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 SLC17A6Q9P2U8 582 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 CD84Q9UIB8 345 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 MBD1Q9UIS9 605 aaPredicted RBP14.27□□□□□ -0.13
COL6A1-202ENST00000463060 FBXO5Q9UKT4 447 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 CNOT6Q9ULM6 557 aaKnown RBP14.27□□□□□ -0.13
COL6A1-202ENST00000463060 ZDBF2Q9HCK1 2354 aa14.27□□□□□ -0.13
COL6A1-202ENST00000463060 PLXNB3Q9ULL4 1909 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 LRRC72A6NJI9 287 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 AGPSO00116 658 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 GPR39O43194 453 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 PRAMEF1O95521 474 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 PAK4O96013 591 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-202ENST00000463060 IGHV4-34P06331 123 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 OGNP20774 298 aaKnown RBP14.26□□□□□ -0.13
COL6A1-202ENST00000463060 TEAD1P28347 426 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 SLC1A2P43004 574 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 LEPRP48357 1165 aaKnown RBP14.26□□□□□ -0.13
COL6A1-202ENST00000463060 EIF3BP55884 814 aaKnown RBP14.26□□□□□ -0.13
COL6A1-202ENST00000463060 ZNF844Q08AG5 666 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 CTBP1Q13363 440 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 NAB1Q13506 487 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 KLHL38Q2WGJ6 581 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 ADGRD1Q6QNK2 874 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 KIAA0408Q6ZU52 694 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 WDR5BQ86VZ2 330 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 TDRPQ86YL5 185 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 CILP2Q8IUL8 1156 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 FAM160A2Q8N612 972 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-202ENST00000463060 CALML6Q8TD86 181 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 DCAKDQ8WVC6 231 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms