RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 SNX21Q969T3 373 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 C18orf8Q96DM3 657 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 TBC1D31Q96DN5 1066 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 CROTQ9UKG9 612 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 PLEKHM1Q9Y4G2 1056 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 PCDHGA9Q9Y5G4 932 aaKnown RBP7.68□□□□□ -1.18
SMC3-202ENST00000462899 OAS3Q9Y6K5 1087 aaKnown RBP7.68□□□□□ -1.18
SMC3-202ENST00000462899 NUP210LQ5VU65 1888 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 SPTBP11277 2137 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 SEC16AO15027 2179 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 A6NCN8 305 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 RASA4BC9J798 803 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 PDE2AO00408 941 aaPredicted RBP7.67□□□□□ -1.18
SMC3-202ENST00000462899 RASA4O43374 803 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 CEACAM4O75871 244 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 PRF1P14222 555 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 XPAP23025 273 aaPredicted RBP7.67□□□□□ -1.18
SMC3-202ENST00000462899 MAN1A1P33908 653 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 DLSTP36957 453 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 PTGIRP43119 386 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 GNPDA1P46926 289 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 HDAC4P56524 1084 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 YBEYP58557 167 aaPredicted RBP7.67□□□□□ -1.18
SMC3-202ENST00000462899 KRT85P78386 507 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 ERV3-1Q14264 604 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 INPP5JQ15735 1006 aaPredicted RBP7.67□□□□□ -1.18
SMC3-202ENST00000462899 C15orf59Q2T9L4 293 aaPredicted RBP7.67□□□□□ -1.18
SMC3-202ENST00000462899 EIF2S3LQ2VIR3 472 aaKnown RBP7.67□□□□□ -1.18
SMC3-202ENST00000462899 PARP15Q460N3 678 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 CCDC14Q49A88 953 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 RWDD4Q6NW29 188 aaKnown RBP7.67□□□□□ -1.18
SMC3-202ENST00000462899 ZNF761Q86XN6 746 aaPredicted RBP7.67□□□□□ -1.18
SMC3-202ENST00000462899 FAM71AQ8IYT1 594 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 UMODL1-AS1Q8N2C9 162 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 EMC1Q8N766 993 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 NTAN1Q96AB6 310 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 NCAPGQ9BPX3 1015 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 CRACR2AQ9BSW2 395 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 LRRC19Q9H756 370 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 SYNCQ9H7C4 482 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 CASS4Q9NQ75 786 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 RCOR3Q9P2K3 495 aaPredicted RBP7.67□□□□□ -1.18
SMC3-202ENST00000462899 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMC3-202ENST00000462899 PCYT1BQ9Y5K3 369 aaPredicted RBP7.67□□□□□ -1.18
SMC3-202ENST00000462899 PIKFYVEQ9Y2I7 2098 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 PKDREJQ9NTG1 2253 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 PCNX1Q96RV3 2341 aa7.67□□□□□ -1.18
SMC3-202ENST00000462899 VPS13CQ709C8 3753 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 GTPBP10A4D1E9 387 aaKnown RBP7.66□□□□□ -1.18
SMC3-202ENST00000462899 C2CD4BA6NLJ0 364 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 A8MU76 341 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 MEN1O00255 615 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 FOXN3O00409 490 aaPredicted RBP7.66□□□□□ -1.18
SMC3-202ENST00000462899 POLR1CO15160 346 aaPredicted RBP7.66□□□□□ -1.18
SMC3-202ENST00000462899 TEX33O43247 280 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 MAN1A2O60476 641 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 CREG1O75629 220 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 GNA14O95837 355 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 C9P02748 559 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 PLEKP08567 350 aaPredicted RBP7.66□□□□□ -1.18
SMC3-202ENST00000462899 LHCGRP22888 699 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 PON1P27169 355 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 KRT9P35527 623 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 USP8P40818 1118 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 ACTR1BP42025 376 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 PTPN9P43378 593 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 POLD2P49005 469 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 EPHA4P54764 986 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 ACTR1AP61163 376 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 NOMO3P69849 1222 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 ATP11AP98196 1134 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 PEX6Q13608 980 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 CNGA3Q16281 694 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 PYCR3Q53H96 274 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 CPZQ66K79 652 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 STRADAQ7RTN6 431 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 KDELC2Q7Z4H8 507 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 SRRM1Q8IYB3 904 aaKnown RBP7.66□□□□□ -1.18
SMC3-202ENST00000462899 PYROXD2Q8N2H3 581 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 TMEM35BQ8NCS4 154 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 OR10G6Q8NH81 332 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 NELFBQ8WX92 580 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 NUS1Q96E22 293 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 DTD2Q96FN9 168 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 CALR3Q96L12 384 aaKnown RBP7.66□□□□□ -1.18
SMC3-202ENST00000462899 SARS2Q9NP81 518 aaKnown RBP7.66□□□□□ -1.18
SMC3-202ENST00000462899 METTL5Q9NRN9 209 aaKnown RBP7.66□□□□□ -1.18
SMC3-202ENST00000462899 PHPT1Q9NRX4 125 aaPredicted RBP7.66□□□□□ -1.18
SMC3-202ENST00000462899 UBA2Q9UBT2 640 aaPredicted RBP7.66□□□□□ -1.18
SMC3-202ENST00000462899 B4GALT6Q9UBX8 382 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 MOSPD1Q9UJG1 213 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 MAN1B1Q9UKM7 699 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 CCDC88CQ9P219 2028 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 SVILO95425 2214 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 NAV3Q8IVL0 2385 aa7.66□□□□□ -1.18
SMC3-202ENST00000462899 CDC14CA4D256 554 aa7.65□□□□□ -1.18
SMC3-202ENST00000462899 J3KR12 359 aa7.65□□□□□ -1.18
SMC3-202ENST00000462899 HTRA2O43464 458 aaPredicted RBP7.65□□□□□ -1.18
SMC3-202ENST00000462899 PRAMEF11O60813 436 aa7.65□□□□□ -1.18
SMC3-202ENST00000462899 HEXIM1O94992 359 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms