RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TXNRD3NBQ6F5E7 133 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 CCDC70Q6NSX1 233 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 SCYL2Q6P3W7 929 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 BHLHA9Q7RTU4 235 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 SLC13A5Q86YT5 568 aaPredicted RBP7.53□□□□□ -1.2
UBE4B-204ENST00000462658 CCDC50Q8IVM0 306 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 VPS52Q8N1B4 723 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 NUP93Q8N1F7 819 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 KCTD6Q8NC69 237 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 SCAMP5Q8TAC9 235 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 MAIP1Q8WWC4 291 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 RAPGEF5Q92565 580 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 CENPIQ92674 756 aaPredicted RBP7.53□□□□□ -1.2
UBE4B-204ENST00000462658 MARS2Q96GW9 593 aaKnown RBP7.53□□□□□ -1.2
UBE4B-204ENST00000462658 TBCBQ99426 244 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 CLSTN3Q9BQT9 956 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 RHOXF2Q9BQY4 288 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 RAB6CQ9H0N0 254 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 MRPL46Q9H2W6 279 aaKnown RBP7.53□□□□□ -1.2
UBE4B-204ENST00000462658 WDCPQ9H6R7 721 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 STK39Q9UEW8 545 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 MTUS1Q9ULD2 1270 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 STAP1Q9ULZ2 295 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 NAALADL1Q9UQQ1 740 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 GOLGA6L10A0A0M3HER8 536 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 WDR27A2RRH5 827 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 LRRD1A4D1F6 860 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 GOLGA6CA6NDK9 693 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 GOLGA6BA6NDN3 693 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 PRSS29PA6NIE9 313 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 CCDC188H7C350 402 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 TUSC2O75896 110 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 SOAT2O75908 522 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 VNN2O95498 520 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 FYNP06241 537 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 LINC00271P0C7V0 271 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 GOLGA6DP0CG33 693 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 RALAP11233 206 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 KDELR1P24390 212 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 TUFMP49411 452 aaKnown RBP7.52□□□□□ -1.21
UBE4B-204ENST00000462658 HDAC4P56524 1084 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 YWHAGP61981 247 aaKnown RBP eCLIP7.52□□□□□ -1.21
UBE4B-204ENST00000462658 RPL10AP62906 217 aaKnown RBP7.52□□□□□ -1.21
UBE4B-204ENST00000462658 ROR1Q01973 937 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 DEUP1Q05D60 604 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 GRM3Q14832 879 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 SMTNL2Q2TAL5 461 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 GLE1Q53GS7 698 aaKnown RBP7.52□□□□□ -1.21
UBE4B-204ENST00000462658 BOLA3Q53S33 107 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 KCNT1Q5JUK3 1230 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 ERMARDQ5T6L9 678 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 BSPRYQ5W0U4 402 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 TPGS2Q68CL5 300 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 MFSD7Q6UXD7 560 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 Q7L0L9 218 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 BEND5Q7L4P6 421 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 STRADAQ7RTN6 431 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 KLHL7Q8IXQ5 586 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 GPR65Q8IYL9 337 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 ZNF276Q8N554 614 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 TMIEQ8NEW7 156 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 CMASQ8NFW8 434 aaPredicted RBP7.52□□□□□ -1.21
UBE4B-204ENST00000462658 TEKT4Q8WW24 435 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 HSPH1Q92598 858 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 NT5C3BQ969T7 300 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 SPATA17Q96L03 361 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 SLITRK1Q96PX8 696 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 PEBP4Q96S96 227 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 KRT12Q99456 494 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 NPY6RQ99463 290 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 SEPT5Q99719 369 aaPredicted RBP7.52□□□□□ -1.21
UBE4B-204ENST00000462658 LRRC1Q9BTT6 524 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 TRIM62Q9BVG3 475 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 HEMGNQ9BXL5 484 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 OSBPL8Q9BZF1 889 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 REXO4Q9GZR2 422 aaKnown RBP7.52□□□□□ -1.21
UBE4B-204ENST00000462658 FBXO44Q9H4M3 255 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 SLC2A4RGQ9NR83 387 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 MRPL17Q9NRX2 175 aaKnown RBP7.52□□□□□ -1.21
UBE4B-204ENST00000462658 ABCC13Q9NSE7 274 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 COMMD8Q9NX08 183 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 OBP2AQ9NY56 170 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 GOLGA6AQ9NYA3 693 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 RRN3Q9NYV6 651 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 IL37Q9NZH6 218 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 AFF4Q9UHB7 1163 aaKnown RBP7.52□□□□□ -1.21
UBE4B-204ENST00000462658 MYO9BQ13459 2157 aa7.52□□□□□ -1.21
UBE4B-204ENST00000462658 UNC80Q8N2C7 3258 aa7.51□□□□□ -1.21
UBE4B-204ENST00000462658 VCANP13611 3396 aa7.51□□□□□ -1.21
UBE4B-204ENST00000462658 hCG_1818297A0A087WSY0 165 aa7.51□□□□□ -1.21
UBE4B-204ENST00000462658 SYNJ2BP-COX16A0A087WUM0 186 aa7.51□□□□□ -1.21
UBE4B-204ENST00000462658 C3orf70A6NLC5 250 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-204ENST00000462658 DIRC3C9JPN6 131 aa7.51□□□□□ -1.21
UBE4B-204ENST00000462658 M0QYT0 321 aa7.51□□□□□ -1.21
UBE4B-204ENST00000462658 MATN3O15232 486 aa7.51□□□□□ -1.21
UBE4B-204ENST00000462658 TJP3O95049 919 aa7.51□□□□□ -1.21
UBE4B-204ENST00000462658 RTN3O95197 1032 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-204ENST00000462658 MATN4O95460 622 aa7.51□□□□□ -1.21
UBE4B-204ENST00000462658 F9P00740 461 aa7.51□□□□□ -1.21
UBE4B-204ENST00000462658 ELANEP08246 267 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms