RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 PCYT1BQ9Y5K3 369 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-204ENST00000462475 HEMK1Q9Y5R4 338 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-204ENST00000462475 TRBV23OR9-2A0A075B6M9 112 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 INPP4BO15327 924 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 WISP1O95388 367 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 EML2O95834 649 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 SERPINC1P01008 464 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 CYP1A2P05177 515 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 ZNF30P17039 623 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 GJC1P36383 396 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 GARSP41250 739 aaKnown RBP16■□□□□ 0.15
COL7A1-204ENST00000462475 SSR1P43307 286 aaKnown RBP16■□□□□ 0.15
COL7A1-204ENST00000462475 ARSEP51690 589 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 EPHB1P54762 984 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 TRA2AQ13595 282 aaKnown RBP eCLIP16■□□□□ 0.15
COL7A1-204ENST00000462475 PEX6Q13608 980 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 DPYSL3Q14195 570 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 IQCB1Q15051 598 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 ALG1LQ6GMV1 187 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 XKR5Q6UX68 686 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 ZNF765Q7L2R6 523 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 GALNT13Q8IUC8 556 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 LRRC49Q8IUZ0 686 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 NDUFAF2Q8N183 169 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 AGBL5Q8NDL9 886 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 LRRN4Q8WUT4 740 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 MAML1Q92585 1016 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 ART4Q93070 314 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 NKD1Q969G9 470 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 COX14Q96I36 57 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 FUCA2Q9BTY2 467 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 RIOK2Q9BVS4 552 aaKnown RBP16■□□□□ 0.15
COL7A1-204ENST00000462475 TDRD1Q9BXT4 1180 aaKnown RBP16■□□□□ 0.15
COL7A1-204ENST00000462475 CHKBQ9Y259 395 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 TTLL3Q9Y4R7 772 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 B3GALT1Q9Y5Z6 326 aa16■□□□□ 0.15
COL7A1-204ENST00000462475 SDK2Q58EX2 2172 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 PRLP01236 227 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 FASLGP48023 281 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 KCNC4Q03721 635 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 SQSTM1Q13501 440 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 CLCA4Q14CN2 919 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 PAFAH1B3Q15102 231 aaKnown RBP15.99■□□□□ 0.15
COL7A1-204ENST00000462475 ATP13A4Q4VNC1 1196 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 NLRP8Q86W28 1048 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 SFRP1Q8N474 314 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 ZMYND15Q9H091 742 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 OCIAD1Q9NX40 245 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 PRKAB1Q9Y478 270 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 OAS3Q9Y6K5 1087 aaKnown RBP15.99■□□□□ 0.15
COL7A1-204ENST00000462475 HECTD1Q9ULT8 2610 aa15.99■□□□□ 0.15
COL7A1-204ENST00000462475 A0A087X0T9 212 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 A0A1W2PQJ5 194 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 MATN3O15232 486 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 CLDN7O95471 211 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 ASMTLO95671 621 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 ATP1A1P05023 1023 aaKnown RBP15.98■□□□□ 0.15
COL7A1-204ENST00000462475 HLA-DQB2P05538 268 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 FAM228BP0C875 321 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 CSTF2P33240 577 aaKnown RBP eCLIP15.98■□□□□ 0.15
COL7A1-204ENST00000462475 UGT1A3P35503 534 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 PBX1P40424 430 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 ATP1A2P50993 1020 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 GPLD1P80108 840 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 NIPAL4Q0D2K0 466 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 LRP8Q14114 963 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 CCDC122Q5T0U0 273 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 TIGD7Q6NT04 549 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-204ENST00000462475 CAVIN1Q6NZI2 390 aaKnown RBP15.98■□□□□ 0.15
COL7A1-204ENST00000462475 TMEM71Q6P5X7 295 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 FAM129CQ86XR2 697 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 CCDC112Q8NEF3 446 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 LPCAT1Q8NF37 534 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 EXD1Q8NHP7 514 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 ARRDC2Q8TBH0 407 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 WDR24Q96S15 920 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 SLC38A3Q99624 504 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 DDA1Q9BW61 102 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 SLC12A9Q9BXP2 914 aa15.98■□□□□ 0.15
COL7A1-204ENST00000462475 RBM22Q9NW64 420 aaKnown RBP eCLIP15.98■□□□□ 0.15
COL7A1-204ENST00000462475 CNOT6Q9ULM6 557 aaKnown RBP15.98■□□□□ 0.15
COL7A1-204ENST00000462475 BZW2Q9Y6E2 419 aaKnown RBP15.98■□□□□ 0.15
COL7A1-204ENST00000462475 UBR5O95071 2799 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-204ENST00000462475 EFCAB7A8K855 629 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 MYO1FO00160 1098 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 DNAJC6O75061 913 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 SERPING1P05155 500 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 PYGLP06737 847 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 LIFP15018 202 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 PPM1FP49593 454 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-204ENST00000462475 GBE1Q04446 702 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 HADHQ16836 314 aaKnown RBP15.97■□□□□ 0.15
COL7A1-204ENST00000462475 ANKRD20A8PQ5CZ79 823 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-204ENST00000462475 ANKS6Q68DC2 871 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 NRSN1Q8IZ57 195 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 BMPERQ8N8U9 685 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 ZNF564Q8TBZ8 553 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-204ENST00000462475 SYN2Q92777 582 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-204ENST00000462475 AHCYL2Q96HN2 611 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms