RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 CRADDP78560 199 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 TMPRSS15P98073 1019 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 LAMB3Q13751 1172 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 MORF4L2Q15014 288 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 MYLKQ15746 1914 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 CACNA1EQ15878 2313 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 PCID2Q5JVF3 399 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 DUPD1Q68J44 220 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 FAM151BQ6UXP7 276 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 ADAMTSL4Q6UY14 1074 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 HEATR4Q86WZ0 1026 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 DCP2Q8IU60 420 aaKnown RBP11.73□□□□□ -0.53
CPNE1-221ENST00000462352 BBOF1Q8ND07 529 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 PPHLN1Q8NEY8 458 aaKnown RBP11.73□□□□□ -0.53
CPNE1-221ENST00000462352 DTX3LQ8TDB6 740 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 STYXQ8WUJ0 223 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 DNAJC1Q96KC8 554 aaKnown RBP11.73□□□□□ -0.53
CPNE1-221ENST00000462352 C19orf43Q9BQ61 176 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 ZSCAN5AQ9BUG6 496 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 LGR4Q9BXB1 951 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 SPATA16Q9BXB7 569 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 TEX101Q9BY14 249 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 ZDHHC5Q9C0B5 715 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 RAB17Q9H0T7 212 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 GDF3Q9NR23 364 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 NLE1Q9NVX2 485 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-221ENST00000462352 SYBUQ9NX95 663 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 WHRNQ9P202 907 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 ANAPC5Q9UJX4 755 aa11.73□□□□□ -0.53
CPNE1-221ENST00000462352 RIF1Q5UIP0 2472 aaKnown RBP11.72□□□□□ -0.53
CPNE1-221ENST00000462352 PI4KAP42356 2102 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 PCDH15Q96QU1 1955 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 SPTY2D1-AS1A0A0U1RR47 76 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 CACNB4O00305 520 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-221ENST00000462352 CCL22O00626 93 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 GAPDHSO14556 408 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-221ENST00000462352 NDC80O14777 642 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 INPP4BO15327 924 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 HOXC4P09017 264 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-221ENST00000462352 MYCLP1P12525 358 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-221ENST00000462352 PSMA3P25788 255 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 MAGEA3P43357 314 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 KIAA1024LP59773 190 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 XIAPP98170 497 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 CDK3Q00526 305 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 SLC7A5Q01650 507 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 CALCOCO2Q13137 446 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 PTK2BQ14289 1009 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 FZD2Q14332 565 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 NFATC4Q14934 902 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 CHRNA6Q15825 494 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 SKIDA1Q1XH10 827 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 PRAMEF14Q5SWL7 426 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 TSTD2Q5T7W7 516 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 PDPK2PQ6A1A2 396 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 IL27RAQ6UWB1 636 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 MACC1Q6ZN28 852 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 PRR23CQ6ZRP0 262 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 NLRP9Q7RTR0 991 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 MPP5Q8N3R9 675 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 OR13J1Q8NGT2 312 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 ZNF778Q96MU6 729 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 GTPBP2Q9BX10 602 aaKnown RBP11.72□□□□□ -0.53
CPNE1-221ENST00000462352 FRMD8Q9BZ67 464 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-221ENST00000462352 CHRAC1Q9NRG0 131 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 PHPT1Q9NRX4 125 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-221ENST00000462352 GRHL1Q9NZI5 618 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 APPL1Q9UKG1 709 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 RIMKLBQ9ULI2 386 aa11.72□□□□□ -0.53
CPNE1-221ENST00000462352 CNOT6Q9ULM6 557 aaKnown RBP11.72□□□□□ -0.53
CPNE1-221ENST00000462352 ZNF292O60281 2723 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 RALGAPA1Q6GYQ0 2036 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 TMEM202A6NGA9 273 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 SDR42E2A6NKP2 422 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 H7C0S8 307 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 GPR39O43194 453 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 FOXD2O60548 495 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 UGT1A9O60656 530 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 SRP72O76094 671 aaKnown RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 PRAMEF1O95521 474 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 CER1O95813 267 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 UGT1A6P19224 532 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 UGT1A1P22309 533 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 UGT1A4P22310 534 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 HTR1BP28222 390 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 MC4RP32245 332 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 UGT1A3P35503 534 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 UGT1A5P35504 534 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 ARSDP51689 593 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 ATXN3P54252 364 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 ACVR1Q04771 509 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 PEX6Q13608 980 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 ITGA9Q13797 1035 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 TRADDQ15628 312 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 ZNF423Q2M1K9 1284 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 HLA-BQ31612 363 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 AASDHQ4L235 1098 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 ATP13A5Q4VNC0 1218 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 GLE1Q53GS7 698 aaKnown RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 FNBP1LQ5T0N5 605 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms