RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 LMLNQ96KR4 655 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 FOPNLQ96NB1 174 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 FCRL3Q96P31 734 aaPredicted RBP5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 TRIB3Q96RU7 358 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 LYSMD1Q96S90 227 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 COPS8Q99627 209 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 HIST1H2AJQ99878 128 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 GORASP1Q9BQQ3 440 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 H2AFJQ9BTM1 129 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 HDAC8Q9BY41 377 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 TMEM245Q9H330 911 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 KDM4CQ9H3R0 1056 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 PRSS16Q9NQE7 514 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 SLC2A4RGQ9NR83 387 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 PCMTD2Q9NV79 361 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 POLR3BQ9NW08 1133 aaPredicted RBP5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 FBXL12Q9NXK8 326 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 CACNA2D2Q9NY47 1150 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 IL17CQ9P0M4 197 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 CDH22Q9UJ99 828 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 TRMT6Q9UJA5 497 aaKnown RBP5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 PPM1HQ9ULR3 514 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 TMCO1Q9UM00 188 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 CRYL1Q9Y2S2 319 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 PPIL1Q9Y3C6 166 aa5.82□□□□□ -1.48
RNU1-88P-201ENST00000459274 PIKFYVEQ9Y2I7 2098 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 A0A096LPK6 155 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 CCDC189A1A4V9 331 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 CCDC162PA2VCL2 907 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 KLHL33A6NCF5 533 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 NPIPB15A6NHN6 443 aaPredicted RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 CXorf49A8MYA2 514 aaPredicted RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 PRMT5O14744 637 aaPredicted RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 TPP1O14773 563 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 TRIM24O15164 1050 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 PRPF4O43172 522 aaKnown RBP eCLIP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 MAP3K13O43283 966 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 KDM1AO60341 852 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 FZD6O60353 706 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 SNX2O60749 519 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 SMIM24O75264 130 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 ZNF217O75362 1048 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 SPAG7O75391 227 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 HAUS5O94927 633 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 SNUPNO95149 360 aaKnown RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 PRLP01236 227 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 AHSGP02765 367 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 GSTM1P09488 218 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 LTA4HP09960 611 aaKnown RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 TROVE2P10155 538 aaKnown RBP eCLIP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 MYL2P10916 166 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 PKMP14618 531 aaKnown RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 CHN1P15882 459 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 KELP23276 732 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 MAP4P27816 1152 aaKnown RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 HTR1BP28222 390 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 FMO4P31512 558 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 CRHR1P34998 444 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 IL12RB1P42701 662 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 SLC1A2P43004 574 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 SOX9P48436 509 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 SPINT3P49223 89 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 ZNF140P52738 457 aaPredicted RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 SATB1Q01826 763 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 PLOD1Q02809 727 aaPredicted RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 GSTM4Q03013 218 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 ACVR1Q04771 509 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 GABPB1Q06547 395 aaPredicted RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 NFATC2Q13469 925 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 CAMK2GQ13555 558 aaPredicted RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 BMPR2Q13873 1038 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 ITIH4Q14624 930 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 EFTUD2Q15029 972 aaKnown RBP eCLIP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 DBN1Q16643 649 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 PTPRNQ16849 979 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 POM121L1PQ3SYA9 428 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 SYTL3Q4VX76 610 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 TTMPQ5BVD1 217 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 TMEM196Q5HYL7 178 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 EGFLAMQ63HQ2 1017 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 TMEM215Q68D42 235 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 RAET1GQ6H3X3 334 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 KIAA1161Q6NSJ0 714 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 NEK5Q6P3R8 708 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 LVRNQ6Q4G3 990 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 CRTC1Q6UUV9 634 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 USP30Q70CQ3 517 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 FRA10AC1Q70Z53 315 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 Q7L0L9 218 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 OTOAQ7RTW8 1153 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 PHYKPLQ8IUZ5 450 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 SLC22A9Q8IVM8 553 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 CNTN4Q8IWV2 1026 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 C4orf33Q8N1A6 199 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 MYO1HQ8N1T3 1032 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 DCLK2Q8N568 766 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 TRAM1L1Q8N609 369 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 TXNDC5Q8NBS9 432 aaKnown RBP5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 CHST14Q8NCH0 376 aa5.81□□□□□ -1.48
RNU1-88P-201ENST00000459274 RPLP0P6Q8NHW5 317 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms