RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 LRRC57Q8N9N7 239 aa17.44■□□□□ 0.38
SCARNA2-201ENST00000458748 CCDC112Q8NEF3 446 aa17.44■□□□□ 0.38
SCARNA2-201ENST00000458748 TADA1Q96BN2 335 aa17.44■□□□□ 0.38
SCARNA2-201ENST00000458748 LRRC45Q96CN5 670 aa17.44■□□□□ 0.38
SCARNA2-201ENST00000458748 TRIB3Q96RU7 358 aa17.44■□□□□ 0.38
SCARNA2-201ENST00000458748 RIOK2Q9BVS4 552 aaKnown RBP17.44■□□□□ 0.38
SCARNA2-201ENST00000458748 GPR63Q9BZJ6 419 aa17.44■□□□□ 0.38
SCARNA2-201ENST00000458748 DPEP2Q9H4A9 486 aa17.44■□□□□ 0.38
SCARNA2-201ENST00000458748 SIRPGQ9P1W8 387 aa17.44■□□□□ 0.38
SCARNA2-201ENST00000458748 GRID2IPA4D2P6 1211 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 KRT86O43790 486 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 ANXA9O76027 345 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 ADCY2Q08462 1091 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 WASHC5Q12768 1159 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 MPP3Q13368 585 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 BIRC2Q13490 618 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 NOMO1Q15155 1222 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 DOK6Q6PKX4 331 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 RBM44Q6ZP01 1051 aaKnown RBP17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 B4GALNT4Q76KP1 1039 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 PDZD3Q86UT5 571 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 PELI3Q8N2H9 469 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 TTC13Q8NBP0 860 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 SCAMP4Q969E2 229 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 FCRL5Q96RD9 977 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 DESI2Q9BSY9 194 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 FSD1LQ9BXM9 530 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 TMEM168Q9H0V1 697 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 TRABDQ9H4I3 376 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 RSPH14Q9UHP6 348 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 SUFUQ9UMX1 484 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 RP1P56715 2156 aa17.43■□□□□ 0.38
SCARNA2-201ENST00000458748 ITPR1Q14643 2758 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 TMX2-CTNND1H3BSU7 103 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 ASMTLO95671 621 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 MT-CYBP00156 380 aaPredicted RBP17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 GLB1P16278 677 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 NFKB1P19838 968 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 DCDC1P59894 354 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 COL9A2Q14055 689 aaPredicted RBP17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 LRP8Q14114 963 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 SPIDRQ14159 915 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 PRPSAP1Q14558 356 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 ZDHHC20Q5W0Z9 365 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 PDPK2PQ6A1A2 396 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 OGFOD3Q6PK18 319 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 LYSMD3Q7Z3D4 306 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 GALNT13Q8IUC8 556 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 LSMEM2Q8N112 164 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 ZNF567Q8N184 647 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 KYQ8NBH2 561 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 SPATA22Q8NHS9 363 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 ACTL9Q8TC94 416 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 GPBAR1Q8TDU6 330 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 SMIM14Q96QK8 99 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 CCDC3Q9BQI4 270 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 ZSCAN5AQ9BUG6 496 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 SUDS3Q9H7L9 328 aaPredicted RBP17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 RMI1Q9H9A7 625 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 HACD3Q9P035 362 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 VPS18Q9P253 973 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 ZNF711Q9Y462 761 aa17.42■□□□□ 0.38
SCARNA2-201ENST00000458748 A0A087WV48 116 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 A0A0U1RQS6 177 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 B4DGG1 531 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 ARHGAP6O43182 974 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 CSO75390 466 aaKnown RBP17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 PNLIPP16233 465 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 HLA-DPA1P20036 260 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 WNT3AP56704 352 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 EIF3EP60228 445 aaKnown RBP17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 OTUD4Q01804 1114 aaKnown RBP17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 C14orf28Q4W4Y0 310 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 ZNF569Q5MCW4 686 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 PERM1Q5SV97 790 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 HENMT1Q5T8I9 393 aaKnown RBP17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 KCTD16Q68DU8 428 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 DARS2Q6PI48 645 aaKnown RBP17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 GPR156Q8NFN8 814 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 SCARF2Q96GP6 870 aaPredicted RBP17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 OR2M4Q96R27 311 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 SPATA16Q9BXB7 569 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 SYNDIG1Q9H7V2 258 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 UBP1Q9NZI7 540 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.41■□□□□ 0.38not detected■■□□□ 12.1
SCARNA2-201ENST00000458748 NFKBIL1Q9UBC1 381 aaPredicted RBP17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 SHOC2Q9UQ13 582 aa17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 AAR2Q9Y312 384 aaKnown RBP17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 COL27A1Q8IZC6 1860 aaPredicted RBP17.41■□□□□ 0.38
SCARNA2-201ENST00000458748 LOC285095A0A1B0GVY8 99 aa17.4■□□□□ 0.38
SCARNA2-201ENST00000458748 GPR89AB7ZAQ6 455 aa17.4■□□□□ 0.38
SCARNA2-201ENST00000458748 INPP4BO15327 924 aa17.4■□□□□ 0.38
SCARNA2-201ENST00000458748 NUDT21O43809 227 aaKnown RBP17.4■□□□□ 0.38
SCARNA2-201ENST00000458748 SOD1P00441 154 aa17.4■□□□□ 0.38
SCARNA2-201ENST00000458748 SLC4A1P02730 911 aa17.4■□□□□ 0.38
SCARNA2-201ENST00000458748 GPR89BP0CG08 455 aa17.4■□□□□ 0.38
SCARNA2-201ENST00000458748 RBP3P10745 1247 aa17.4■□□□□ 0.38
SCARNA2-201ENST00000458748 PYGMP11217 842 aa17.4■□□□□ 0.38
SCARNA2-201ENST00000458748 RBL1P28749 1068 aa17.4■□□□□ 0.38
SCARNA2-201ENST00000458748 CD68P34810 354 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms