RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 SLC12A9Q9BXP2 914 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 SLC39A1Q9NY26 324 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 PDP2Q9P2J9 529 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 PTPN13Q12923 2485 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 TERTO14746 1132 aaKnown RBP21.4■■□□□ 1.02
CPNE1-220ENST00000458038 SOD1P00441 154 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 PDHA1P08559 390 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 TCF4P15884 667 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 CTPS1P17812 591 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 WT1P19544 449 aaPredicted RBP21.4■■□□□ 1.02
CPNE1-220ENST00000458038 ANP32AP39687 249 aaKnown RBP21.4■■□□□ 1.02
CPNE1-220ENST00000458038 RPL26P61254 145 aaKnown RBP21.4■■□□□ 1.02
CPNE1-220ENST00000458038 ITKQ08881 620 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 KRT81Q14533 505 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 ANO6Q4KMQ2 910 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 CCDC122Q5T0U0 273 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 DCAF12Q5T6F0 453 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 ART4Q93070 314 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 SH3KBP1Q96B97 665 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 COX14Q96I36 57 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 FUCA2Q9BTY2 467 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 SLC25A18Q9H1K4 315 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 VPS18Q9P253 973 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 RPL26L1Q9UNX3 145 aaKnown RBP21.4■■□□□ 1.02
CPNE1-220ENST00000458038 TMEM98Q9Y2Y6 226 aa21.4■■□□□ 1.02
CPNE1-220ENST00000458038 A0A1B0GTH6 734 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 MATN3O15232 486 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 ARHGAP6O43182 974 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 DUX1O43812 170 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 SKILP12757 684 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 MAN1A1P33908 653 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 UGT1A3P35503 534 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 GARSP41250 739 aaKnown RBP21.39■■□□□ 1.01
CPNE1-220ENST00000458038 STC1P52823 247 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 SLC25A11Q02978 314 aaKnown RBP21.39■■□□□ 1.01
CPNE1-220ENST00000458038 HADHQ16836 314 aaKnown RBP21.39■■□□□ 1.01
CPNE1-220ENST00000458038 NKAIN2Q5VXU1 208 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 BORAQ6PGQ7 559 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 WDR74Q6RFH5 385 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-220ENST00000458038 SFRP1Q8N474 314 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 FAM71BQ8TC56 605 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 HTR3CQ8WXA8 447 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 SYN2Q92777 582 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-220ENST00000458038 SCAMP4Q969E2 229 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 CATSPER2Q96P56 530 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 SLC38A3Q99624 504 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 ZPBPQ9BS86 351 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 STN1Q9H668 368 aaKnown RBP21.39■■□□□ 1.01
CPNE1-220ENST00000458038 RMI1Q9H9A7 625 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 CD84Q9UIB8 345 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 TUBD1Q9UJT1 453 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 B3GALT1Q9Y5Z6 326 aa21.39■■□□□ 1.01
CPNE1-220ENST00000458038 MYO1FO00160 1098 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 SLC2A4P14672 509 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 CSF2RBP32927 897 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 ZNF165P49910 485 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 ARSDP51689 593 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 CYP4F2P78329 520 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 PTPRRQ15256 657 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 IFI16Q16666 785 aaKnown RBP21.38■■□□□ 1.01
CPNE1-220ENST00000458038 TXNRD3NBQ6F5E7 133 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 CACNA2D3Q8IZS8 1091 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 SLC37A2Q8TED4 501 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 MAML1Q92585 1016 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 TSGA13Q96PP4 275 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 ANAPC7Q9UJX3 599 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 PLEKHM1Q9Y4G2 1056 aa21.38■■□□□ 1.01
CPNE1-220ENST00000458038 COL12A1Q99715 3063 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 PYCARD-AS1I3L0S3 204 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 ASMTLO95671 621 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 IL4RP24394 825 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 CCNCP24863 283 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 GALNT2Q10471 571 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 PAFAH1B3Q15102 231 aaKnown RBP21.37■■□□□ 1.01
CPNE1-220ENST00000458038 TDRD12Q587J7 1177 aaKnown RBP21.37■■□□□ 1.01
CPNE1-220ENST00000458038 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.37■■□□□ 1.01
CPNE1-220ENST00000458038 AVL9Q8NBF6 648 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 JPH3Q8WXH2 748 aaPredicted RBP21.37■■□□□ 1.01
CPNE1-220ENST00000458038 LYSMD1Q96S90 227 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 EFHD1Q9BUP0 239 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 RIOK2Q9BVS4 552 aaKnown RBP21.37■■□□□ 1.01
CPNE1-220ENST00000458038 ZMYND15Q9H091 742 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 EPB41L1Q9H4G0 881 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 SARS2Q9NP81 518 aaKnown RBP21.37■■□□□ 1.01
CPNE1-220ENST00000458038 ZNHIT2Q9UHR6 403 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 FLNCQ14315 2725 aa21.37■■□□□ 1.01
CPNE1-220ENST00000458038 RGSL1A5PLK6 1076 aa21.36■■□□□ 1.01
CPNE1-220ENST00000458038 MAP4P27816 1152 aaKnown RBP21.36■■□□□ 1.01
CPNE1-220ENST00000458038 PPM1FP49593 454 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-220ENST00000458038 HHEXQ03014 270 aa21.36■■□□□ 1.01
CPNE1-220ENST00000458038 NR1I3Q14994 352 aa21.36■■□□□ 1.01
CPNE1-220ENST00000458038 RFLNAQ6ZTI6 216 aa21.36■■□□□ 1.01
CPNE1-220ENST00000458038 MARK2Q7KZI7 788 aaKnown RBP21.36■■□□□ 1.01
CPNE1-220ENST00000458038 FAM129CQ86XR2 697 aa21.36■■□□□ 1.01
CPNE1-220ENST00000458038 HERPUD2Q9BSE4 406 aa21.36■■□□□ 1.01
CPNE1-220ENST00000458038 NUP85Q9BW27 656 aa21.36■■□□□ 1.01
CPNE1-220ENST00000458038 TDRD1Q9BXT4 1180 aaKnown RBP21.36■■□□□ 1.01
CPNE1-220ENST00000458038 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-220ENST00000458038 THAP2Q9H0W7 228 aa21.36■■□□□ 1.01
CPNE1-220ENST00000458038 FBXO8Q9NRD0 319 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms