RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 UTP20O75691 2785 aaKnown RBP15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 TLN1Q9Y490 2541 aaKnown RBP15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 LRRD1A4D1F6 860 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 ASMTLO95671 621 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 HLA-DQB2P05538 268 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 PNLIPP16233 465 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 CCNCP24863 283 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 TEAD1P28347 426 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 ALDH4A1P30038 563 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 CCKBRP32239 447 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 ACTR1BP42025 376 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 ACTR1AP61163 376 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 GBE1Q04446 702 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 TLE1Q04724 770 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 ZNF574Q6ZN55 896 aaPredicted RBP15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 RFLNAQ6ZTI6 216 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 MARK2Q7KZI7 788 aaKnown RBP15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 TRIM74Q86UV6 250 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 CCDC13Q8IYE1 715 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 OR8K1Q8NGG5 319 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 GPBAR1Q8TDU6 330 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 OR2M4Q96R27 311 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 ABCG8Q9H221 673 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 TSPY26PQ9H489 355 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 AMACRQ9UHK6 382 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 NENFQ9UMX5 172 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 TMEM98Q9Y2Y6 226 aa15.68■□□□□ 0.1
CHCHD3-204ENST00000457942 ZFC3H1O60293 1989 aaKnown RBP15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 INPP4BO15327 924 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 SUV39H1O43463 412 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 FZD6O60353 706 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 ECEL1O95672 775 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 PYGLP06737 847 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 IVLP07476 585 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 TMEM253P0C7T8 217 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 ITGB6P18564 788 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 HNRNPH3P31942 346 aaKnown RBP15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 MAN1A1P33908 653 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 ADCY8P40145 1251 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 MAPK10P53779 464 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 CTBSQ01459 385 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 DPTQ07507 201 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 ALG1LQ6GMV1 187 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 ADAMTSL4Q6UY14 1074 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 TECPR1Q7Z6L1 1165 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 NRROSQ86YC3 692 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 GALNT13Q8IUC8 556 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 RNF214Q8ND24 703 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 PTCD2Q8WV60 388 aaKnown RBP15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 SCAMP4Q969E2 229 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 TSGA13Q96PP4 275 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 CMKLR1Q99788 373 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 RDH14Q9HBH5 336 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 PCDH9Q9HC56 1237 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 AKAP7Q9P0M2 348 aaPredicted RBP15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 ANKMY1Q9P2S6 941 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 SLC17A4Q9Y2C5 497 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 PPIL1Q9Y3C6 166 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 HEY1Q9Y5J3 304 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 SCN8AQ9UQD0 1980 aa15.67■□□□□ 0.1
CHCHD3-204ENST00000457942 DOPEY2Q9Y3R5 2298 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 C1orf232A0A0U1RR37 186 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 KCNK1O00180 336 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 CPNE6O95741 557 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 JCHAINP01591 159 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 FUCA1P04066 466 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 KRT1P04264 644 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 FGF1P05230 155 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 TNNT1P13805 278 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 ITIH1P19827 911 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 KDELR1P24390 212 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 CD86P42081 329 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 STC1P52823 247 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 OR1D5P58170 312 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 PTSQ03393 145 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 AP1B1Q10567 949 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 ZNF765Q7L2R6 523 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 PIM3Q86V86 326 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 PTRH1Q86Y79 214 aaKnown RBP15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 CBARPQ8N350 705 aaPredicted RBP15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 PQLC3Q8N755 202 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 PATE1Q8WXA2 126 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 RAPGEF5Q92565 580 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 FAF2Q96CS3 445 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 HDAC11Q96DB2 347 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 DNAJC7Q99615 494 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 RIOK2Q9BVS4 552 aaKnown RBP15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 MAK16Q9BXY0 300 aaKnown RBP15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 DTLQ9NZJ0 730 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 SEPT10Q9P0V9 454 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 PCDHGA7Q9Y5G6 932 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 PCDHGA4Q9Y5G9 962 aa15.66■□□□□ 0.1
CHCHD3-204ENST00000457942 SSU72P8A0A1W2PR75 194 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 APOL1O14791 398 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 CLDN7O95471 211 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 SOD1P00441 154 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 SLC4A1P02730 911 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 WT1P19544 449 aaPredicted RBP15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 RPL26P61254 145 aaKnown RBP15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 NIPAL4Q0D2K0 466 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms