RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CNTN1Q12860 1018 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 NR1H3Q13133 447 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 CAMK2GQ13555 558 aaPredicted RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 GAS6Q14393 721 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 ZKSCAN8Q15776 578 aaPredicted RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 GRTP1Q5TC63 336 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 TPRG1Q6ZUI0 275 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 Q6ZVL8 140 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 TECPR1Q7Z6L1 1165 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 CENPLQ8N0S6 344 aaPredicted RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 TMEM151AQ8N4L1 468 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 KDM1BQ8NB78 822 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 GPR150Q8NGU9 434 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 OR4L1Q8NH43 312 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 CSGALNACT1Q8TDX6 532 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 KCTD4Q8WVF5 259 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 MOCOSQ96EN8 888 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 APOPT1Q96IL0 206 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 BIRC8Q96P09 236 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 GPR78Q96P69 363 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 GABRG3Q99928 467 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 FAM167BQ9BTA0 163 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 WRAP53Q9BUR4 548 aaKnown RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 MECRQ9BV79 373 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 MKRN2Q9H000 416 aaKnown RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 ZNF395Q9H8N7 513 aaPredicted RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 ZFYVE1Q9HBF4 777 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 KCNK9Q9NPC2 374 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 CD320Q9NPF0 282 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 CATSPERZQ9NTU4 200 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 TMEM216Q9P0N5 145 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 DKK3Q9UBP4 350 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 RPL26L1Q9UNX3 145 aaKnown RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 PRUNE2Q8WUY3 3088 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 PIKFYVEQ9Y2I7 2098 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 TRBV5-4A0A0C4DH59 114 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 IQANK1A0A1B0GTG1 560 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 K7ESM1 405 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 PRPF4O43172 522 aaKnown RBP eCLIP8.69□□□□□ -1.02
RIF1-208ENST00000457745 SGTAO43765 313 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 NIPSNAP2O75323 286 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 MTX2O75431 263 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 SRP72O76094 671 aaKnown RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 ASMTLO95671 621 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 CRTAMO95727 393 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 IL1BP01584 269 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 C2P06681 752 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 DHRS4L1P0CG22 281 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 OGNP20774 298 aaKnown RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 FDXRP22570 491 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 ITGB7P26010 798 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 P2RY2P41231 377 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 RECQLP46063 649 aaPredicted RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 CD151P48509 253 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 SPINT3P49223 89 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 SERPINB9P50453 376 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 ST8SIA6P61647 398 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 RPS14P62263 151 aaKnown RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 IRX4P78413 519 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 ZP2Q05996 745 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 SF3A3Q12874 501 aaKnown RBP eCLIP8.69□□□□□ -1.02
RIF1-208ENST00000457745 GPS2Q13227 327 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 FZD5Q13467 585 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 THOC5Q13769 683 aaKnown RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 CCINQ13939 588 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 FGL2Q14314 439 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 ATP13A5Q4VNC0 1218 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 ZRANB3Q5FWF4 1079 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 HECTD2Q5U5R9 776 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 AGBL4Q5VU57 503 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 CGB2Q6NT52 195 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 AFTPHQ6ULP2 937 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 XKR5Q6UX68 686 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 NAPRTQ6XQN6 538 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 LIPIQ6XZB0 460 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 NLRP9Q7RTR0 991 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 CHPFQ8IZ52 775 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 NDUFAF2Q8N183 169 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 OTUD6BQ8N6M0 293 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 GPATCH11Q8N954 259 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 TXNDC5Q8NBS9 432 aaKnown RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 TMIEQ8NEW7 156 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 OR8D1Q8WZ84 308 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 CDKL2Q92772 493 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 ELMO2Q96JJ3 720 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 COQ10AQ96MF6 247 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 FAM111AQ96PZ2 611 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 SRPK1Q96SB4 655 aaKnown RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 AARSD1Q9BTE6 412 aaKnown RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 SLC13A1Q9BZW2 595 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 RSPH9Q9H1X1 276 aaPredicted RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 P2RY12Q9H244 342 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 VPS11Q9H270 941 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 PPCSQ9HAB8 311 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 TRPV5Q9NQA5 729 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 IGSF5Q9NSI5 407 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 HACD3Q9P035 362 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 CA14Q9ULX7 337 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms