RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 OR4L1Q8NH43 312 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 DNAJB8Q8NHS0 232 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ITFG1Q8TB96 612 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 BLOC1S5Q8TDH9 187 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 RAB2BQ8WUD1 216 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CANT1Q8WVQ1 401 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 HDAC10Q969S8 669 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 KIAA1191Q96A73 305 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 VPS33AQ96AX1 596 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 LRRC58Q96CX6 371 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 FUBP3Q96I24 572 aaKnown RBP eCLIP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 BTN2A3PQ96KV6 586 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 UBXN10Q96LJ8 280 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CCDC138Q96M89 665 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZFP42Q96MM3 310 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZNF599Q96NL3 588 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 RDH12Q96NR8 316 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PGLYRP2Q96PD5 576 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PLEKHG4BQ96PX9 1271 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CDK5RAP1Q96SZ6 601 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 GAD1Q99259 594 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SH3GL1Q99961 368 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 GPATCH1Q9BRR8 931 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 C17orf80Q9BSJ5 609 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 AARSD1Q9BTE6 412 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 BEGAINQ9BUH8 593 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CINPQ9BW66 212 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 LRRC3Q9BY71 257 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SEZ6LQ9BYH1 1024 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 DERL2Q9GZP9 239 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 POLR1EQ9GZS1 481 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 KATNBL1Q9H079 304 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CXCL16Q9H2A7 254 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ATXN3LQ9H3M9 355 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ALG2Q9H553 416 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 RETREG1Q9H6L5 497 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 AGO3Q9H9G7 860 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CXorf21Q9HAI6 301 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SPC25Q9HBM1 224 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PREBQ9HCU5 417 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ATP13A1Q9HD20 1204 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 HPS4Q9NQG7 708 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ACSS2Q9NR19 701 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SDR39U1Q9NRG7 319 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 OLAHQ9NV23 265 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 RNF19AQ9NV58 838 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 FAIMQ9NVQ4 179 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 DNAAF2Q9NVR5 837 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 AIG1Q9NVV5 245 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 TMEM248Q9NWD8 314 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SMOXQ9NWM0 555 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 OSER1Q9NX31 292 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 NUDT4Q9NZJ9 180 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CD274Q9NZQ7 290 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 RNF181Q9P0P0 153 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 GMIPQ9P107 970 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 UXTQ9UBK9 157 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 GNPTGQ9UJJ9 305 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ITGB1BP2Q9UKP3 347 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CDH7Q9ULB5 785 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PAIP2BQ9ULR5 123 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PCDHB8Q9UN66 801 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SCML2Q9UQR0 700 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 TLR6Q9Y2C9 796 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SH3GLB1Q9Y371 365 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 RNF11Q9Y3C5 154 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 TNPO3Q9Y5L0 923 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 TIMM13Q9Y5L4 95 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 HS3ST4Q9Y661 456 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 MYO16Q9Y6X6 1858 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZNF638Q14966 1978 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ANKRD36A6QL64 1941 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 PATJQ8NI35 1801 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 MYOCOSA0A1B0GUC4 107 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 ATP6AP2A0A1C7CYW4 349 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 A0A1W2PQH9 124 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 TTC24A2A3L6 582 aaPredicted RBP3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 LCHNA4D1U4 455 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 C7orf72A4D263 438 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 IQCA1LA6NCM1 817 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 MROH6A6NGR9 719 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 ARL5CA6NH57 179 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 TRIM64CA6NLI5 447 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 CFAP99D6REC4 459 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 F5H5T6 163 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 H3BMQ9 156 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 M0QZQ0 153 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 HAS3O00219 553 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 SLC28A1O00337 649 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 BTN3A1O00481 513 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 KPNA4O00629 521 aaPredicted RBP3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 EI24O14681 340 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 MSI1O43347 362 aaKnown RBP3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 RGS14O43566 566 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 SYNCRIPO60506 623 aaKnown RBP3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 ATP6AP2O75787 350 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 B3GAT3O94766 335 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 DDNO94850 711 aaPredicted RBP3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 CDK14O94921 469 aa3.31□□□□□ -1.88
HMGN1P18-201ENST00000457642 SCELO95171 688 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms