RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 UGT3A1Q6NUS8 523 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 PRR23BQ6ZRT6 265 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 KIAA0408Q6ZU52 694 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 RBM23Q86U06 439 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 PHYKPLQ8IUZ5 450 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 EXOC8Q8IYI6 725 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 DCP1BQ8IZD4 617 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 ZCCHC7Q8N3Z6 543 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 TTC30BQ8N4P2 665 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 C2CD4AQ8NCU7 369 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 CHDHQ8NE62 594 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 HTRA1Q92743 480 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 MUL1Q969V5 352 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 CCDC126Q96EE4 140 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 NPY6RQ99463 290 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 GPR20Q99678 358 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 CCDC90BQ9GZT6 254 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 TUBB1Q9H4B7 451 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 SMURF2Q9HAU4 748 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 HPS4Q9NQG7 708 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 PAK1IP1Q9NWT1 392 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 SLCO3A1Q9UIG8 710 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 ZNF229Q9UJW7 825 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 TRHDEQ9UKU6 1024 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 PDE10AQ9Y233 779 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 SHROOM3Q8TF72 1996 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 CLDN5O00501 218 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 STAU1O95793 577 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 VTNP04004 478 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 RPL34P49207 117 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 TKTL1P51854 596 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 KPNA2P52292 529 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 OR4D2P58180 307 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 VBP1P61758 197 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 ECT2LQ008S8 904 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 TNFAIP2Q03169 654 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 GALNT1Q10472 559 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 PPP1R8Q12972 351 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 RPS6KA2Q15349 733 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 CLPPQ16740 277 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 FBXO48Q5FWF7 155 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 RBM48Q5RL73 367 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 CATSPEREQ5SY80 951 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 C6orf141Q5SZD1 244 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 GPR158Q5T848 1215 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 ATAD3BQ5T9A4 648 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 BLOC1S3Q6QNY0 202 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 TMEM207Q6UWW9 146 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 CTU1Q7Z7A3 348 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 LDB1Q86U70 411 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 PIM3Q86V86 326 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 RALGPS2Q86X27 583 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 PTRH1Q86Y79 214 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 C8orf59Q8N0T1 100 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 OR7A2PQ8NGA2 310 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 TWIST2Q8WVJ9 160 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 NT5C3BQ969T7 300 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 TUBGCP3Q96CW5 907 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 VMP1Q96GC9 406 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 MAGED4Q96JG8 741 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 NSUN5Q96P11 429 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 FICDQ9BVA6 458 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 INTS7Q9NVH2 962 aaKnown RBP10.28□□□□□ -0.76
CLIP4-208ENST00000456385 GJD2Q9UKL4 321 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 LCTP09848 1927 aa10.28□□□□□ -0.76
CLIP4-208ENST00000456385 ZBBXA8MT70 800 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 CAPN15O75808 1086 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 CDK14O94921 469 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 PCMT1P22061 227 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 TPD52P55327 224 aaPredicted RBP10.27□□□□□ -0.77
CLIP4-208ENST00000456385 ADAM17P78536 824 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 DAG1Q14118 895 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 SNX17Q15036 470 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 ARL13BQ3SXY8 428 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 TAF2Q6P1X5 1199 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 PDZD4Q76G19 769 aaPredicted RBP10.27□□□□□ -0.77
CLIP4-208ENST00000456385 BNIPLQ7Z465 357 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 LGI2Q8N0V4 545 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 CLYBLQ8N0X4 340 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 OR52K2Q8NGK3 314 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 BPIFB1Q8TDL5 484 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 OSCP1Q8WVF1 389 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 GLMNQ92990 594 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 OTUD5Q96G74 571 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 BTN2A3PQ96KV6 586 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 UBXN10Q96LJ8 280 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 TBL1YQ9BQ87 522 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 TRIM54Q9BYV2 358 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 AMBRA1Q9C0C7 1298 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 EPS8L2Q9H6S3 715 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 RMND5AQ9H871 391 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 MID1IP1Q9NPA3 183 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 SDR39U1Q9NRG7 319 aaPredicted RBP10.27□□□□□ -0.77
CLIP4-208ENST00000456385 FAM118AQ9NWS6 357 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 IFT52Q9Y366 437 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 SOWAHBA6NEL2 793 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 NDUFS2O75306 463 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 DAB1O75553 588 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 LRIG2O94898 1065 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms