RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 RNF112Q9ULX5 631 aa15□□□□□ -0.01
LDLR-202ENST00000455727 PCDHGC4Q9Y5F7 938 aa15□□□□□ -0.01
LDLR-202ENST00000455727 COMMD10Q9Y6G5 202 aa15□□□□□ -0.01
LDLR-202ENST00000455727 STX16O14662 325 aa15□□□□□ -0.01
LDLR-202ENST00000455727 TRIM24O15164 1050 aa15□□□□□ -0.01
LDLR-202ENST00000455727 KLK8O60259 260 aa15□□□□□ -0.01
LDLR-202ENST00000455727 NRP2O60462 931 aa15□□□□□ -0.01
LDLR-202ENST00000455727 CLASP2O75122 1294 aaKnown RBP15□□□□□ -0.01
LDLR-202ENST00000455727 C1RP00736 705 aa15□□□□□ -0.01
LDLR-202ENST00000455727 SOD2P04179 222 aa15□□□□□ -0.01
LDLR-202ENST00000455727 CAPNS1P04632 268 aa15□□□□□ -0.01
LDLR-202ENST00000455727 ADARP55265 1226 aaKnown RBP15□□□□□ -0.01
LDLR-202ENST00000455727 STX1BP61266 288 aa15□□□□□ -0.01
LDLR-202ENST00000455727 TRAP1Q12931 704 aaKnown RBP15□□□□□ -0.01
LDLR-202ENST00000455727 TRIM25Q14258 630 aaKnown RBP15□□□□□ -0.01
LDLR-202ENST00000455727 TAF12Q16514 161 aa15□□□□□ -0.01
LDLR-202ENST00000455727 C8orf82Q6P1X6 216 aaPredicted RBP15□□□□□ -0.01
LDLR-202ENST00000455727 FBXO39Q8N4B4 442 aa15□□□□□ -0.01
LDLR-202ENST00000455727 CATSPER1Q8NEC5 780 aa15□□□□□ -0.01
LDLR-202ENST00000455727 C3orf30Q96M34 536 aa15□□□□□ -0.01
LDLR-202ENST00000455727 TMCO1Q9UM00 188 aa15□□□□□ -0.01
LDLR-202ENST00000455727 FAM50BQ9Y247 325 aa15□□□□□ -0.01
LDLR-202ENST00000455727 YIPF1Q9Y548 306 aa15□□□□□ -0.01
LDLR-202ENST00000455727 PLXNA4Q9HCM2 1894 aa15□□□□□ -0.01
LDLR-202ENST00000455727 BBIP1A8MTZ0 92 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 TSPAN3O60637 253 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 VPS26AO75436 327 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 TMCC1O94876 653 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 PKMP14618 531 aaKnown RBP14.99□□□□□ -0.01
LDLR-202ENST00000455727 VCLP18206 1134 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 GPX3P22352 226 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 AQP4P55087 323 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 MRPS22P82650 360 aaKnown RBP14.99□□□□□ -0.01
LDLR-202ENST00000455727 CLCQ05315 142 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 LCP2Q13094 533 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 MED21Q13503 144 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 VEPH1Q14D04 833 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 PTPRNQ16849 979 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 C16orf59Q7L2K0 433 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 TTC30BQ8N4P2 665 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 TWIST2Q8WVJ9 160 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 ROPN1LQ96C74 230 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 CYP2S1Q96SQ9 504 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 ZBED2Q9BTP6 218 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 SPAG4Q9NPE6 437 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 ADA2Q9NZK5 511 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 RIMS3Q9UJD0 308 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 PRSS51A0A1B0GVH4 220 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 ATP6AP2A0A1C7CYW4 349 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 C2orf78A6NCI8 922 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 E7ENX8 843 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 KIF3CO14782 793 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 PQBP1O60828 265 aaKnown RBP14.99□□□□□ -0.01
LDLR-202ENST00000455727 VPS4BO75351 444 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 ATP6AP2O75787 350 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 ALDOCP09972 364 aaKnown RBP14.99□□□□□ -0.01
LDLR-202ENST00000455727 ARSAP15289 507 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 TRAF2Q12933 501 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 ADGRE1Q14246 886 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 AARS2Q5JTZ9 985 aaKnown RBP14.99□□□□□ -0.01
LDLR-202ENST00000455727 RARS2Q5T160 578 aaKnown RBP14.99□□□□□ -0.01
LDLR-202ENST00000455727 ANKS6Q68DC2 871 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 TXNDC11Q6PKC3 985 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 FUNDC1Q8IVP5 155 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 PCDH20Q8N6Y1 951 aaKnown RBP14.99□□□□□ -0.01
LDLR-202ENST00000455727 RNF148Q8N7C7 305 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 ICA1LQ8NDH6 482 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 ADCY4Q8NFM4 1077 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 WBP2Q969T9 261 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 FUBP1Q96AE4 644 aaKnown RBP14.99□□□□□ -0.01
LDLR-202ENST00000455727 LRGUKQ96M69 825 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 GPR21Q99679 349 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 HIPK3Q9H422 1215 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 LHX3Q9UBR4 397 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 DTNAQ9Y4J8 743 aa14.99□□□□□ -0.01
LDLR-202ENST00000455727 SUPT3HB4E1H0 165 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 PPP6CO00743 305 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 MRASO14807 208 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 STX7O15400 261 aaKnown RBP14.98□□□□□ -0.01
LDLR-202ENST00000455727 SUPT3HO75486 399 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 ECI2O75521 394 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 RPS17P08708 135 aaKnown RBP14.98□□□□□ -0.01
LDLR-202ENST00000455727 IRF1P10914 325 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 EEF1DP29692 281 aaKnown RBP14.98□□□□□ -0.01
LDLR-202ENST00000455727 MC4RP32245 332 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 MSX2P35548 267 aaPredicted RBP14.98□□□□□ -0.01
LDLR-202ENST00000455727 PLD1Q13393 1074 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 PSAPL1Q6NUJ1 521 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 PAOXQ6QHF9 649 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 PHYKPLQ8IUZ5 450 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 PIANPQ8IYJ0 282 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 RIN3Q8TB24 985 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 TMEM181Q9P2C4 612 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 CD300AQ9UGN4 299 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 FKBPLQ9UIM3 349 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 CROTQ9UKG9 612 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 LRRC14BA6NHZ5 514 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 PIP5K1BO14986 540 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 FZD6O60353 706 aa14.98□□□□□ -0.01
LDLR-202ENST00000455727 RNASEH1O60930 286 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms