RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 CPED1A4D0V7 1026 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 GTPBP10A4D1E9 387 aaKnown RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 DPPA5A6NC42 116 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 TMEM8BA6NDV4 472 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 ENO4A6NNW6 628 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 WDR46O15213 610 aaKnown RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 CLIC2O15247 247 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 IPO8O15397 1037 aaKnown RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 PLPP2O43688 288 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 SIX3O95343 332 aaPredicted RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 TFPIP10646 304 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 TKTP29401 623 aaKnown RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 PRKCIP41743 596 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 PRCPP42785 496 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 PPP3CCP48454 512 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 SLC12A2P55011 1212 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 YBEYP58557 167 aaPredicted RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 HSF1Q00613 529 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 SREBF2Q12772 1141 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 ITGADQ13349 1161 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 MEP1BQ16820 701 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 PNLIPRP3Q17RR3 467 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 KLHL26Q53HC5 615 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 NHSL2Q5HYW2 709 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 PIK3CD-AS1Q5SR53 167 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 ARMC4Q5T2S8 1044 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 PAPD7Q5XG87 772 aaKnown RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 NSUN5P2Q63ZY6 315 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 ALKBH5Q6P6C2 394 aaKnown RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 TTLL10Q6ZVT0 673 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 FAM57BQ71RH2 274 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 OTOAQ7RTW8 1153 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 SPATA19Q7Z5L4 167 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 SPRED1Q7Z699 444 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 CCDC91Q7Z6B0 441 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 DSG4Q86SJ6 1040 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 CNPY4Q8N129 248 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 SIX6OS1Q8N1H7 587 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 TEX45Q8NA69 505 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 MCUQ8NE86 351 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 TSPAN14Q8NG11 270 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 OCC1Q8TAD7 63 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 OSR1Q8TAX0 266 aaPredicted RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 SETD6Q8TBK2 473 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 GRK7Q8WTQ7 553 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 RSPH1Q8WYR4 309 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 LARP4BQ92615 738 aaKnown RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 TMEM18Q96B42 140 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 SARAFQ96BY9 339 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 ZNF570Q96NI8 536 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 INTS14Q96SY0 518 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 GFI1Q99684 422 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 MGME1Q9BQP7 344 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 MMADHCQ9H3L0 296 aaPredicted RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 DNAJC18Q9H819 358 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 MMP25Q9NPA2 562 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 GPR108Q9NPR9 543 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 RNF146Q9NTX7 359 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 CISD1Q9NZ45 108 aaKnown RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 SLC17A6Q9P2U8 582 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 SLC9A2Q9UBY0 812 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 TSPYL4Q9UJ04 414 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 ERVK-11Q9UQG0 969 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 PCDHGA5Q9Y5G8 931 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 PCDHGA1Q9Y5H4 931 aa4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.21□□□□□ -1.74
HMGN3P1-201ENST00000453847 A0A1W2PPC1 479 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 A6NNC1 897 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 AKR1B15C9JRZ8 316 aaPredicted RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 F8W810 466 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 CCDC188H7C350 402 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 RTCAO00442 366 aaKnown RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 HTATSF1O43719 755 aaKnown RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 KINO60870 393 aaKnown RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 SLC22A3O75751 556 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 SUPT20HL2P0C7V6 817 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 CYP11B2P19099 503 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 MAOAP21397 527 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 PIGAP37287 484 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 EIF2S3P41091 472 aaKnown RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 METAP2P50579 478 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 ADARP55265 1226 aaKnown RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 ACTN3Q08043 901 aaPredicted RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 EFEMP1Q12805 493 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 STIM1Q13586 685 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 LASP1Q14847 261 aaKnown RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 SMTNL2Q2TAL5 461 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 VWC2Q2TAL6 325 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 EIF2S3LQ2VIR3 472 aaKnown RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 SUPT20HL1Q3ZLR7 823 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 KRTCAP3Q53RY4 240 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 XP32Q5T750 250 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 DHRS7BQ6IAN0 325 aaPredicted RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 LCN10Q6JVE6 187 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 ZNF449Q6P9G9 518 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 PAPD4Q6PIY7 484 aaKnown RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 HAUS6Q7Z4H7 955 aa4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 CENPVQ7Z7K6 275 aaPredicted RBP4.2□□□□□ -1.74
HMGN3P1-201ENST00000453847 NDUFAF2Q8N183 169 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms