RNA–Protein interactions for RNA: ENST00000453707.6

CITED1-209, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CITED1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-209ENST00000453707 CCHCR1Q8TD31 782 aa13.15□□□□□ -0.3
CITED1-209ENST00000453707 PTCD2Q8WV60 388 aaKnown RBP13.15□□□□□ -0.3
CITED1-209ENST00000453707 PATE1Q8WXA2 126 aa13.15□□□□□ -0.3
CITED1-209ENST00000453707 JPH3Q8WXH2 748 aaPredicted RBP13.15□□□□□ -0.3
CITED1-209ENST00000453707 CTNNBL1Q8WYA6 563 aaPredicted RBP13.15□□□□□ -0.3
CITED1-209ENST00000453707 SCAMP4Q969E2 229 aa13.15□□□□□ -0.3
CITED1-209ENST00000453707 CCDC74BQ96LY2 380 aa13.15□□□□□ -0.3
CITED1-209ENST00000453707 DPYSL5Q9BPU6 564 aa13.15□□□□□ -0.3
CITED1-209ENST00000453707 RIOK2Q9BVS4 552 aaKnown RBP13.15□□□□□ -0.3
CITED1-209ENST00000453707 DEF6Q9H4E7 631 aa13.15□□□□□ -0.3
CITED1-209ENST00000453707 FOXJ2Q9P0K8 574 aa13.15□□□□□ -0.3
CITED1-209ENST00000453707 AMACRQ9UHK6 382 aa13.15□□□□□ -0.3
CITED1-209ENST00000453707 PLEKHM1Q9Y4G2 1056 aa13.15□□□□□ -0.3
CITED1-209ENST00000453707 RP1P56715 2156 aa13.15□□□□□ -0.3
CITED1-209ENST00000453707 PTPRQQ9UMZ3 2332 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 C1orf232A0A0U1RR37 186 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 C9orf172C9J069 976 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 STMND1H3BQB6 276 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 SLC28A2O43868 658 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 CLDN7O95471 211 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 H2AFZP0C0S5 128 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 IL4RP24394 825 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 MPSTP25325 297 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 CD1CP29017 333 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 SRSF6Q13247 344 aaKnown RBP13.14□□□□□ -0.31
CITED1-209ENST00000453707 TRA2AQ13595 282 aaKnown RBP eCLIP13.14□□□□□ -0.31
CITED1-209ENST00000453707 LRP8Q14114 963 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 DPYSL3Q14195 570 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 ATP13A4Q4VNC1 1196 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 NCBP2-AS2Q69YL0 99 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 H2AFVQ71UI9 128 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 ZNF765Q7L2R6 523 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 PRICKLE2Q7Z3G6 844 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 ZNF438Q7Z4V0 828 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 C17orf82Q86X59 251 aaPredicted RBP13.14□□□□□ -0.31
CITED1-209ENST00000453707 FAM129CQ86XR2 697 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 IL22RA1Q8N6P7 574 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 AGBL5Q8NDL9 886 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 OR10G6Q8NH81 332 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.14□□□□□ -0.31
CITED1-209ENST00000453707 TAAR9Q96RI9 348 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 ZNF670Q9BS34 389 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 TDRD1Q9BXT4 1180 aaKnown RBP13.14□□□□□ -0.31
CITED1-209ENST00000453707 MAK16Q9BXY0 300 aaKnown RBP13.14□□□□□ -0.31
CITED1-209ENST00000453707 PCDH9Q9HC56 1237 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 PKD2L2Q9NZM6 624 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 LCMT1Q9UIC8 334 aa13.14□□□□□ -0.31
CITED1-209ENST00000453707 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.14□□□□□ -0.31
CITED1-209ENST00000453707 ANKRD36A6QL64 1941 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 LRRK1Q38SD2 2015 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 IGHV5-10-1A0A0J9YXX1 117 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 PPM1DO15297 605 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 FZD6O60353 706 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 PROSCO94903 275 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 CCL4P13236 92 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 NOP2P46087 812 aaKnown RBP13.13□□□□□ -0.31
CITED1-209ENST00000453707 STC1P52823 247 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 LIMK2P53671 638 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 RPL26P61254 145 aaKnown RBP13.13□□□□□ -0.31
CITED1-209ENST00000453707 GPLD1P80108 840 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 NR1D2Q14995 579 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 PYCR3Q53H96 274 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 SNAP47Q5SQN1 464 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 XKR5Q6UX68 686 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 CHST15Q7LFX5 561 aaPredicted RBP13.13□□□□□ -0.31
CITED1-209ENST00000453707 NLRP8Q86W28 1048 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 CCDC13Q8IYE1 715 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 OR4D9Q8NGE8 314 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 LRRN4Q8WUT4 740 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 MAML1Q92585 1016 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 EXTL1Q92935 676 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 SMIM14Q96QK8 99 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 AGAP2Q99490 1192 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 MLPHQ9BV36 600 aaPredicted RBP13.13□□□□□ -0.31
CITED1-209ENST00000453707 ADGRE3Q9BY15 652 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 GRPEL1Q9HAV7 217 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 ZNHIT6Q9NWK9 470 aaKnown RBP13.13□□□□□ -0.31
CITED1-209ENST00000453707 SLC39A1Q9NY26 324 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 UVRAGQ9P2Y5 699 aa13.13□□□□□ -0.31
CITED1-209ENST00000453707 RPL26L1Q9UNX3 145 aaKnown RBP13.13□□□□□ -0.31
CITED1-209ENST00000453707 COL27A1Q8IZC6 1860 aaPredicted RBP13.12□□□□□ -0.31
CITED1-209ENST00000453707 IGHV1OR21-1A0A087WYE8 117 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 GOLGA6L3A6NEY3 463 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 DUX1O43812 170 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 SNX2O60749 519 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 MFAP3LO75121 409 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 JCHAINP01591 159 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 ATP1A1P05023 1023 aaKnown RBP13.12□□□□□ -0.31
CITED1-209ENST00000453707 ITGB2P05107 769 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 HLA-DQB2P05538 268 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 TPM1P09493 284 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 SFTPCP11686 197 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 SLC2A4P14672 509 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 CD86P42081 329 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 MAPK9P45984 424 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 ARSEP51690 589 aa13.12□□□□□ -0.31
CITED1-209ENST00000453707 HHEXQ03014 270 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms