RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 AGPAT1Q99943 283 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 SNRNP25Q9BV90 132 aaKnown RBP14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 SUDS3Q9H7L9 328 aaPredicted RBP14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 SEPT11Q9NVA2 429 aaKnown RBP14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 TAB2Q9NYJ8 693 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 TMEM9Q9P0T7 183 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 SIK3Q9Y2K2 1263 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 PCDHGC4Q9Y5F7 938 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 MN1Q10571 1320 aaPredicted RBP14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 USP9XQ93008 2570 aaPredicted RBP14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 GOLGA6CA6NDK9 693 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 GOLGA6BA6NDN3 693 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 LILRA5A6NI73 299 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 SOD1P00441 154 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 GOLGA6DP0CG33 693 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 MPSTP25325 297 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 PSMA2P25787 234 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 POLD2P49005 469 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 CDH6P55285 790 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 DPYSQ14117 519 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 DEFB109BQ30KR1 87 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 CDKAL1Q5VV42 579 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 ACAD10Q6JQN1 1059 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 SLC9B2Q86UD5 537 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 LRRC49Q8IUZ0 686 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 CCDC13Q8IYE1 715 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 TEX19Q8NA77 164 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 NEK11Q8NG66 645 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 ENOX1Q8TC92 643 aaKnown RBP14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 COX14Q96I36 57 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 UCK1Q9HA47 277 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 NOD2Q9HC29 1040 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 PRDM8Q9NQV8 689 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 HAUS2Q9NVX0 235 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 GOLGA6AQ9NYA3 693 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 KCND3Q9UK17 655 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 POLHQ9Y253 713 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 KCNMB2Q9Y691 235 aa14.19□□□□□ -0.14
LYSMD3-202ENST00000453259 SPTAN1Q13813 2472 aaKnown RBP14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 EPHB6O15197 1021 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 CES1P23141 567 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 SERPINB6P35237 376 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 PPM1FP49593 454 aaPredicted RBP14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 OGDHQ02218 1023 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 TRAF2Q12933 501 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 MAMLD1Q13495 774 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 IL11RAQ14626 422 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 KRT31Q15323 416 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 PPP6R3Q5H9R7 873 aaPredicted RBP14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 DENND2CQ68D51 928 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 PLEKHA7Q6IQ23 1121 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 IYDQ6PHW0 289 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 DOK6Q6PKX4 331 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 ARHGAP36Q6ZRI8 547 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 TIPARPQ7Z3E1 657 aaKnown RBP14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 ANKRD20A12PQ8NF67 263 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 PTCD2Q8WV60 388 aaKnown RBP14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 KCTD15Q96SI1 283 aaPredicted RBP14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 GPATCH2LQ9NWQ4 482 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 SIDT1Q9NXL6 827 aaKnown RBP14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 PLAAQ9Y263 795 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 RPS6KL1Q9Y6S9 549 aa14.18□□□□□ -0.14
LYSMD3-202ENST00000453259 GOLGA6L3A6NEY3 463 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 GPR89AB7ZAQ6 455 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 H3BRJ5 948 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 INPP4BO15327 924 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 RFPL1O75677 317 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 MAP3K6O95382 1288 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 PEX11BO96011 259 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 GPR89BP0CG08 455 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 F3P13726 295 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 FERP16591 822 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 CA4P22748 312 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 ARL4AP40617 200 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 MMP13P45452 471 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 RPL26P61254 145 aaKnown RBP14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 DPYSL2Q16555 572 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 CA9Q16790 459 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 MARC1Q5VT66 337 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 LRRC66Q68CR7 880 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 TMCO3Q6UWJ1 677 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 LYSMD3Q7Z3D4 306 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 ATPAF2Q8N5M1 289 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 GALNT11Q8NCW6 608 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 NCSTNQ92542 709 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 NSMCE3Q96MG7 304 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 ULBP3Q9BZM4 244 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 ABCG8Q9H221 673 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 CWC15Q9P013 229 aaKnown RBP14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 CNOT8Q9UFF9 292 aaKnown RBP14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 AMACRQ9UHK6 382 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 MYO6Q9UM54 1294 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 RPL26L1Q9UNX3 145 aaKnown RBP14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 TP53TG5Q9Y2B4 290 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 PCDHGA6Q9Y5G7 932 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 UNC79Q9P2D8 2635 aa14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 SPTBN1Q01082 2364 aaKnown RBP14.17□□□□□ -0.14
LYSMD3-202ENST00000453259 MYO9AB2RTY4 2548 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 A0A0J9YYE9 177 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 BLACEA4D250 179 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms