RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CFIP05156 583 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 SPAM1P38567 509 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 AFF3P51826 1226 aaKnown RBP12.97□□□□□ -0.33
VPS33A-202ENST00000451053 DCDC1P59894 354 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 PFN3P60673 137 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 TMPRSS15P98073 1019 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 BNC1Q01954 994 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 DPTQ07507 201 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 DHX9Q08211 1270 aaKnown RBP12.97□□□□□ -0.33
VPS33A-202ENST00000451053 DUOXA1Q1HG43 343 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 TRIM61Q5EBN2 209 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 PCID2Q5JVF3 399 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 TPRG1LQ5T0D9 272 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 FNBP1LQ5T0N5 605 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 HENMT1Q5T8I9 393 aaKnown RBP12.97□□□□□ -0.33
VPS33A-202ENST00000451053 RAET1GQ6H3X3 334 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 TCEAL6Q6IPX3 200 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 FBXO38Q6PIJ6 1188 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 Q6ZSR6 202 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 TRMT10CQ7L0Y3 403 aaKnown RBP12.97□□□□□ -0.33
VPS33A-202ENST00000451053 ASCL5Q7RTU5 278 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 RELL1Q8IUW5 271 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 AGGF1Q8N302 714 aaeCLIP12.97□□□□□ -0.33
VPS33A-202ENST00000451053 MFSD2AQ8NA29 543 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 PPHLN1Q8NEY8 458 aaKnown RBP12.97□□□□□ -0.33
VPS33A-202ENST00000451053 TCEAL3Q969E4 200 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 ZNF778Q96MU6 729 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 TTC25Q96NG3 672 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 PLEKHG4BQ96PX9 1271 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 IL22Q9GZX6 179 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 IL26Q9NPH9 171 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 RAD18Q9NS91 495 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 NLE1Q9NVX2 485 aaPredicted RBP12.97□□□□□ -0.33
VPS33A-202ENST00000451053 NCDNQ9UBB6 729 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 NFKBIL1Q9UBC1 381 aaPredicted RBP12.97□□□□□ -0.33
VPS33A-202ENST00000451053 SLC2A6Q9UGQ3 507 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 FKBPLQ9UIM3 349 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 OR1A2Q9Y585 309 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 SDK1Q7Z5N4 2213 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 WDFY4Q6ZS81 3184 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 FADS2P1A8MWK0 482 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 E7ESA3 106 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 GAPDHSO14556 408 aaPredicted RBP12.96□□□□□ -0.33
VPS33A-202ENST00000451053 VILLO15195 856 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 GPR39O43194 453 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 FAM153BP0C7A2 387 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 THEGLP0DJG4 465 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 TSHRP16473 764 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 ADRA1DP25100 572 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 GPR1P46091 355 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 ARSDP51689 593 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 PDE1BQ01064 536 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 SPEM2Q0P670 501 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 PDIA2Q13087 525 aaKnown RBP12.96□□□□□ -0.33
VPS33A-202ENST00000451053 TEAD4Q15561 434 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 CHRNA6Q15825 494 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 FAM153CQ494X1 144 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 MSS51Q4VC12 460 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 BEND6Q5SZJ8 279 aaPredicted RBP12.96□□□□□ -0.33
VPS33A-202ENST00000451053 TSTD2Q5T7W7 516 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 SLC23A3Q6PIS1 610 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 FAM151BQ6UXP7 276 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 RABEPKQ7Z6M1 372 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 IQCHQ86VS3 1027 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 NLRP8Q86W28 1048 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 CCNJLQ8IV13 435 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 SLC22A18ASQ8N1D0 253 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 MREGQ8N565 214 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 DCLK2Q8N568 766 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 TRAM1L1Q8N609 369 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 CEP76Q8TAP6 659 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 KLHDC7BQ96G42 594 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 SIGLEC10Q96LC7 697 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 NAT9Q9BTE0 207 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 APOOQ9BUR5 198 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 SPATA16Q9BXB7 569 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 CDH19Q9H159 772 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 CAPN10Q9HC96 672 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 SAYSD1Q9NPB0 183 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 CHRAC1Q9NRG0 131 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 GPR27Q9NS67 375 aa12.96□□□□□ -0.33
VPS33A-202ENST00000451053 ZNF106Q9H2Y7 1883 aaKnown RBP12.95□□□□□ -0.34
VPS33A-202ENST00000451053 GLYATL1P3A0A0U1RQE8 302 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 SDR42E2A6NKP2 422 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 TLR4O00206 839 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 INPP4BO15327 924 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 PSMA3P25788 255 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 NMBRP28336 390 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 TEAD1P28347 426 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 CA5AP35218 305 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 TRIM23P36406 574 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 MAGEA4P43358 317 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 RABIFP47224 123 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 PMS2P54278 862 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 C21orf59P57076 290 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 NXPH1P58417 271 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 IRX4P78413 519 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 XIAPP98170 497 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 LAMB3Q13751 1172 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 PDE1CQ14123 709 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms