RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 C9orf172C9J069 976 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 MATN3O15232 486 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PPM1DO15297 605 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 FZD6O60353 706 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 SOD1P00441 154 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 TRBC1P01850 177 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CCL4P13236 92 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CD1CP29017 333 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ARSEP51690 589 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 GALNT2Q10471 571 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PEX6Q13608 980 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 IHHQ14623 411 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PAFAH1B3Q15102 231 aaKnown RBP16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 MANEAQ5SRI9 462 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 TMEM164Q5U3C3 297 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 NKAIN2Q5VXU1 208 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 NCBP2-AS2Q69YL0 99 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ADAMTSL4Q6UY14 1074 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CPNE8Q86YQ8 564 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ZNF564Q8TBZ8 553 aaPredicted RBP16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 FAM71BQ8TC56 605 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CTNNBL1Q8WYA6 563 aaPredicted RBP16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 OR2M4Q96R27 311 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 AGAP2Q99490 1192 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CDH19Q9H159 772 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PCDHB11Q9Y5F2 797 aa16.5■□□□□ 0.23
RAB11FIP3-204ENST00000449879 IGHV5-10-1A0A0J9YXX1 117 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 J3QKU1 62 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 INPP4BO15327 924 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ASMTLO95671 621 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ZNF30P17039 623 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CES1P23141 567 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CCNCP24863 283 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 GPR3P46089 330 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 NR1D2Q14995 579 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 IFI16Q16666 785 aaKnown RBP16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PYCR3Q53H96 274 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ANKRD20A8PQ5CZ79 823 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 TIGD7Q6NT04 549 aaPredicted RBP16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 VASH2Q86V25 355 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 MAML1Q92585 1016 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 SGF29Q96ES7 293 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 SCARF2Q96GP6 870 aaPredicted RBP16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 RIOK2Q9BVS4 552 aaKnown RBP16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CTTNBP2NLQ9P2B4 639 aa16.49■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CLDN7O95471 211 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PRLP01236 227 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 H2AFZP0C0S5 128 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 MPSTP25325 297 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PPM1FP49593 454 aaPredicted RBP16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 STC1P52823 247 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PDK2Q15119 407 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CLPPQ16740 277 aaPredicted RBP16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ZFYVE27Q5T4F4 411 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 H2AFVQ71UI9 128 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 NLRP8Q86W28 1048 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 MAP7D3Q8IWC1 876 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 EXD1Q8NHP7 514 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ARRDC2Q8TBH0 407 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 JPH3Q8WXH2 748 aaPredicted RBP16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CCDC74BQ96LY2 380 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 TSGA13Q96PP4 275 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 TDRD1Q9BXT4 1180 aaKnown RBP16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 SPTLC3Q9NUV7 552 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 KCNK4Q9NYG8 393 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ZNHIT2Q9UHR6 403 aa16.48■□□□□ 0.23
RAB11FIP3-204ENST00000449879 IGHV1OR21-1A0A087WYE8 117 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 HGSO14964 777 aaPredicted RBP16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PROSCO94903 275 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ATP1A1P05023 1023 aaKnown RBP16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PYGLP06737 847 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 TMEM253P0C7T8 217 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 LIMK2P53671 638 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 TAS2R40P59535 323 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 GBE1Q04446 702 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 NIPAL4Q0D2K0 466 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 LINC00303Q3SY05 128 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ALG1LQ6GMV1 187 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ZNF765Q7L2R6 523 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ZNF761Q86XN6 746 aaPredicted RBP16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 DTX1Q86Y01 620 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 GALNT13Q8IUC8 556 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 NRSN1Q8IZ57 195 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 EXD3Q8N9H8 876 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CCNYQ8ND76 341 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 LPCAT1Q8NF37 534 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 EXTL1Q92935 676 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ARHGAP9Q9BRR9 750 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ZNF670Q9BS34 389 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PACSIN1Q9BY11 444 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PCDH9Q9HC56 1237 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 HAUS2Q9NVX0 235 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 UVRAGQ9P2Y5 699 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 AMACRQ9UHK6 382 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 PRKAB1Q9Y478 270 aa16.47■□□□□ 0.23
RAB11FIP3-204ENST00000449879 ZFC3H1O60293 1989 aaKnown RBP16.46■□□□□ 0.23
RAB11FIP3-204ENST00000449879 HLA-DQB2P05538 268 aa16.46■□□□□ 0.23
RAB11FIP3-204ENST00000449879 KRT7P08729 469 aa16.46■□□□□ 0.23
RAB11FIP3-204ENST00000449879 FGF3P11487 239 aaPredicted RBP16.46■□□□□ 0.23
RAB11FIP3-204ENST00000449879 CA4P22748 312 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms