RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 NUMBP49757 651 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 LIMK2P53671 638 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 BROXQ5VW32 411 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 TRMT10BQ6PF06 316 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 CYP20A1Q6UW02 462 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 LINC00523Q86TU6 105 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 SFRP1Q8N474 314 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 DHRSXQ8N5I4 330 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 ZNF669Q96BR6 464 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 PEBP4Q96S96 227 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 VAT1Q99536 393 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 YTHDF1Q9BYJ9 559 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 SNX15Q9NRS6 342 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 ABI2Q9NYB9 513 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 FOSL1P15407 271 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 PAMP19021 973 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 IL32P24001 234 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 MGAT1P26572 445 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 BCAT1P54687 386 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 ANO4Q32M45 955 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 INTS11Q5TA45 600 aaKnown RBP13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 C9orf57Q5W0N0 161 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 STRA8Q7Z7C7 330 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 SIMC1Q8NDZ2 872 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 BEST2Q8NFU1 509 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 GRPEL2Q8TAA5 225 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 SLC35F5Q8WV83 523 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 DNAJB3Q8WWF6 145 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 FAM49AQ9H0Q0 323 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 GPATCH2LQ9NWQ4 482 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 TRHDEQ9UKU6 1024 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 TCRBV3S1A0A5B6 114 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 NTRK1P04629 796 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 KCNE1P15382 129 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 PSME3P61289 254 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 POLD3Q15054 466 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 SOWAHAQ2M3V2 549 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 PPP1R26Q5T8A7 1209 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 LIPMQ5VYY2 423 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 PQLC3Q8N755 202 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 PMEPA1Q969W9 287 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 DACH2Q96NX9 599 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 APBA2Q99767 749 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 SPC25Q9HBM1 224 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 TSC2P49815 1807 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 FAM149AA5PLN7 773 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 MANSC4A6NHS7 340 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 ERVH48-1M5A8F1 160 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 USP12O75317 370 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 SEPHS1P49903 392 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 HUNKP57058 714 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 SLC12A1Q13621 1099 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 RAB6CQ53S08 254 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 ERMP1Q7Z2K6 904 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 TFAP2DQ7Z6R9 452 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 GATAD2AQ86YP4 633 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 GALNT12Q8IXK2 581 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 CACTIN-AS1Q8N1I8 211 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 TRPV1Q8NER1 839 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 CANT1Q8WVQ1 401 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 JPH3Q8WXH2 748 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 PSKH2Q96QS6 385 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 RBBP8Q99708 897 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 MKRN2Q9H000 416 aaKnown RBP13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 RAB6CQ9H0N0 254 aa13.43□□□□□ -0.26
SYNGAP1-204ENST00000449372 CENPXA8MT69 81 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 PURAQ00577 322 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 POU6F1Q14863 301 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 STK11Q15831 433 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 XAF1Q6GPH4 301 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 NAPEPLDQ6IQ20 393 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 CATSPER4Q7RTX7 472 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 GIMAP1Q8WWP7 306 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 DPF3Q92784 378 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 MAGED4Q96JG8 741 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 TASP1Q9H6P5 420 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 WDR70Q9NW82 654 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 COL4A4P53420 1690 aaPredicted RBP13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 E7ENX8 843 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 M0R3G1 203 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 UGT2B11O75310 529 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 GRAP2O75791 330 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 RECQL4O94761 1208 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 CD40LGP29965 261 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 CAPGP40121 348 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 RGS7P49802 495 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 CLCNKBP51801 687 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 BST2Q10589 180 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 SH3PXD2AQ5TCZ1 1133 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 LINC00299Q6ZSB3 139 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 SLC26A9Q7LBE3 791 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 PAF1Q8N7H5 531 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 SMG8Q8ND04 991 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 HSFY1Q96LI6 401 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 C11orf84Q9BUA3 381 aaPredicted RBP13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 AURKCQ9UQB9 309 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 CPT1AP50416 773 aa13.42□□□□□ -0.26
SYNGAP1-204ENST00000449372 AIF1P55008 147 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms