RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TMEM98Q9Y2Y6 226 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 SPO11Q9Y5K1 396 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 AHCTF1Q8WYP5 2266 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 UNC13CQ8NB66 2214 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 MACROD2A1Z1Q3 448 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 FADS2P1A8MWK0 482 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 NTN3O00634 580 aaPredicted RBP13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 AURKAO14965 403 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 PMPCBO75439 489 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 FGF1P05230 155 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 PYGLP06737 847 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 ADCY8P40145 1251 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 OTUD4Q01804 1114 aaKnown RBP13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 PYCR3Q53H96 274 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 PID1Q7Z2X4 250 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 TAF8Q7Z7C8 310 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 KYQ8NBH2 561 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 FAM46DQ8NEK8 389 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 MAPK15Q8TD08 544 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 GLMNQ92990 594 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 NAT6Q93015 286 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 HIC2Q96JB3 615 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 CARS2Q9HA77 564 aaKnown RBP13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 ZFYVE1Q9HBF4 777 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 EVA1BQ9NVM1 165 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 NFKBIL1Q9UBC1 381 aaPredicted RBP13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 GULP1Q9UBP9 304 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 AMFRQ9UKV5 643 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 SHOC2Q9UQ13 582 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 PLEKHM1Q9Y4G2 1056 aa13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 PCYT1BQ9Y5K3 369 aaPredicted RBP13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 OAS3Q9Y6K5 1087 aaKnown RBP13.99□□□□□ -0.17
RTFDC1-204ENST00000449062 ZFHX4Q86UP3 3567 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 MYLKQ15746 1914 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 A0A1W2PNU3 283 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 MIF4GDA9UHW6 222 aaKnown RBP13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 DNAJC6O75061 913 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 FTCDO95954 541 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 GSDMDP57764 484 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 CTBSQ01459 385 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 KLF1Q13351 362 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 MSLNQ13421 630 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 HLTFQ14527 1009 aaKnown RBP eCLIP13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 PCSK7Q16549 785 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 PEX26Q7Z412 305 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 TRIM74Q86UV6 250 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 KLHDC8BQ8IXV7 354 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 TTC30BQ8N4P2 665 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 CCHCR1Q8TD31 782 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 TMPRSS11EQ9UL52 423 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 PACSIN2Q9UNF0 486 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 ZNF711Q9Y462 761 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 PCDHB1Q9Y5F3 818 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 CAPN6Q9Y6Q1 641 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 PTPRQQ9UMZ3 2332 aa13.98□□□□□ -0.17
RTFDC1-204ENST00000449062 H7C0C1 242 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 TJP3O95049 919 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 RBP3P10745 1247 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 BPIP17213 487 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 AK4P27144 223 aaPredicted RBP13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 ADRA1AP35348 466 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 CHRNA4P43681 627 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 ATP5OP48047 213 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 DCDC1P59894 354 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 ISXQ2M1V0 245 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 SIRPB2Q5JXA9 342 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 CERCAMQ5T4B2 595 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 RANBP10Q6VN20 620 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 SYCE1Q8N0S2 351 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 TXLNBQ8N3L3 684 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 SRPK1Q96SB4 655 aaKnown RBP13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 FAM118BQ9BPY3 351 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 CCDC3Q9BQI4 270 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 CDH19Q9H159 772 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 ABCG4Q9H172 646 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 PKD2L2Q9NZM6 624 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 TAAR2Q9P1P5 351 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 SIRPGQ9P1W8 387 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 VPS18Q9P253 973 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 KLHL8Q9P2G9 620 aaPredicted RBP13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 MOSPD1Q9UJG1 213 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 APPL1Q9UKG1 709 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 DOLKQ9UPQ8 538 aa13.97□□□□□ -0.17
RTFDC1-204ENST00000449062 IGSF10Q6WRI0 2623 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 COL27A1Q8IZC6 1860 aaPredicted RBP13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 A0A1W2PQM1 296 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 TCRBV7S2A1N4TA0A589 114 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 GOLGA6CA6NDK9 693 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 GOLGA6BA6NDN3 693 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 INPP4BO15327 924 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 ARHGAP6O43182 974 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 TCEA3O75764 348 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 ATP1A1P05023 1023 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 GOLGA6DP0CG33 693 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 PNLIPP16233 465 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 HMGCLP35914 325 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 GNPDA1P46926 289 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 PDX1P52945 283 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 EIF3EP60228 445 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 MPP3Q13368 585 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms