RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 DPAGT1Q9H3H5 408 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 NOP16Q9Y3C1 178 aaKnown RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 PCDHGA8Q9Y5G5 932 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 AP4B1Q9Y6B7 739 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 TUBAL3A6NHL2 446 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 BBIP1A8MTZ0 92 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 BOLA2-SMG1P6H3BVE0 249 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 CYP2E1P05181 493 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 ANPEPP15144 967 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 EPHB3P54753 998 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 LRIF1Q5T3J3 769 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 FAM46CQ5VWP2 391 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 APTXQ7Z2E3 356 aaKnown RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 ATAD1Q8NBU5 361 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 ANKRD7Q92527 254 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 STRA6Q9BX79 667 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 GNG8Q9UK08 70 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 MYH7BA7E2Y1 1941 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 STK17BO94768 372 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 SLC2A2P11168 524 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 CKBP12277 381 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 MAP3K8P41279 467 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 CRY1Q16526 586 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 DOK7Q18PE1 504 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 FIGNL1Q6PIW4 674 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 ERI1Q8IV48 349 aaKnown RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 KAT2BQ92831 832 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 B3GNT4Q9C0J1 378 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 SLC5A7Q9GZV3 580 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 PCCAP05165 728 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 MB21D2Q8IYB1 491 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 OR6J1Q8NGC5 347 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 ACTRT1Q8TDG2 376 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 CELF4Q9BZC1 486 aaKnown RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 NT5MQ9NPB1 228 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 PCDHGA5Q9Y5G8 931 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 A0A0A6YYK5 440 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 M0R233 179 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 LSM8O95777 96 aaKnown RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 IGSF6O95976 241 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 IL1R1P14778 569 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF20P17024 532 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CDK8P49336 464 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 MANFP55145 182 aaKnown RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 MARSP56192 900 aaKnown RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 NFE2Q16621 373 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF311Q5JNZ3 666 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ALG1LQ6GMV1 187 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF773Q6PK81 442 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 STK35Q8TDR2 534 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 HCAR2Q8TDS4 363 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 TOP1MTQ969P6 601 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 SLC7A6OSQ96CW6 309 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CIPCQ9C0C6 399 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 NME7Q9Y5B8 376 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 H7C417 338 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 IL1AP01583 271 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 RPLP0P05388 317 aaKnown RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 GSTM2P28161 218 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 AGTR1P30556 359 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 SSTR3P32745 418 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 RPA3P35244 121 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 KCNJ1P48048 391 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 GMPSP49915 693 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 NCS1P62166 190 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 IRF8Q02556 426 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CSTF1Q05048 431 aaKnown RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 TXNRD1Q16881 649 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 DNM1P34Q6PK57 102 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 LRRN1Q6UXK5 716 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 PTAR1Q7Z6K3 402 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CEP97Q8IW35 865 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 C22orf15Q8WYQ4 148 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 VAT1Q99536 393 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 TMED9Q9BVK6 235 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CDC42EP4Q9H3Q1 356 aaKnown RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 A0A096LPK6 155 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 A0A1B0GTH6 734 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 URODP06132 367 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 AMPD1P23109 780 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CTHP32929 405 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 TTPAP49638 278 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 FABP6P51161 128 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ALDH5A1P51649 535 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 SELENOVP59797 346 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF267Q14586 743 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 WSCD2Q2TBF2 565 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CERCAMQ5T4B2 595 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 RANBP3LQ86VV4 465 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CARNMT1Q8N4J0 409 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CLIP3Q96DZ5 547 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 TMEM45AQ9NWC5 275 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 FXYD6-FXYD2A0A087WZ82 144 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF878C9JN71 531 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 INMTO95050 263 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 MAPK8P45983 427 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 GNG2P59768 71 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 PCDH1Q08174 1060 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 POU6F1Q14863 301 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 SMYD5Q6GMV2 418 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms