RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ZBTB33Q86T24 672 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 WDTC1Q8N5D0 677 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 CCDC185Q8N715 623 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 ZNF300Q96RE9 604 aaPredicted RBP19.15■□□□□ 0.66
HMGA1-205ENST00000447654 TWNKQ96RR1 684 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 DGCR6LQ9BY27 220 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 SLCO3A1Q9UIG8 710 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 OSGIN1Q9UJX0 560 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 UBDO15205 165 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 B4GALT4O60513 344 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 CCDC159P0C7I6 412 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 CYP2C8P10632 490 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 BCAR1P56945 870 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 MYL6P60660 151 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 C1QTNF8P60827 252 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 YWHAEP62258 255 aaKnown RBP19.15■□□□□ 0.66
HMGA1-205ENST00000447654 FOXM1Q08050 763 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 TMEM132AQ24JP5 1023 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 CELF3Q5SZQ8 465 aaKnown RBP19.15■□□□□ 0.66
HMGA1-205ENST00000447654 FAM122CQ6P4D5 195 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 SPPL2CQ8IUH8 684 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 SMG8Q8ND04 991 aaKnown RBP19.15■□□□□ 0.66
HMGA1-205ENST00000447654 JOSD2Q8TAC2 188 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 NDNFQ8TB73 568 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 FAM110BQ8TC76 370 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 YIPF6Q96EC8 236 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 NODALQ96S42 347 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 LHX5Q9H2C1 402 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 EPS8L2Q9H6S3 715 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 RPRD1BQ9NQG5 326 aaKnown RBP19.15■□□□□ 0.66
HMGA1-205ENST00000447654 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.15■□□□□ 0.66
HMGA1-205ENST00000447654 XYLBO75191 536 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 TRIM16O95361 564 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 METTL18O95568 372 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 CST3P01034 146 aaPredicted RBP19.14■□□□□ 0.65
HMGA1-205ENST00000447654 YES1P07947 543 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 GJA9P57773 515 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 LAMTOR4Q0VGL1 99 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 DPY19L1Q2PZI1 675 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 CATSPEREQ5SY80 951 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 PAGE2Q7Z2X7 111 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 VN1R5Q7Z5H4 357 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 UBE2Q1Q7Z7E8 422 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 CMC1Q7Z7K0 106 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 P2RY8Q86VZ1 359 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 TMEM130Q8N3G9 435 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 MAP6Q96JE9 813 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 TSNARE1Q96NA8 513 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 TMEM134Q9H6X4 195 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 PCSK1NQ9UHG2 260 aa19.14■□□□□ 0.65
HMGA1-205ENST00000447654 AGAP5A6NIR3 686 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 BET1O15155 118 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 POLBP06746 335 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 PTGS2P35354 604 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 FAM182AQ5T1J6 154 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 FAM160B1Q5W0V3 765 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 CASC4Q6P4E1 433 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 PQLC3Q8N755 202 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 SPPL2BQ8TCT7 592 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 CERS2Q96G23 380 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 IL20Q9NYY1 176 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 SLC17A6Q9P2U8 582 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 PABPN1LA6NDY0 278 aaKnown RBP19.13■□□□□ 0.65
HMGA1-205ENST00000447654 THRBP10828 461 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 SPNP16150 400 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 OR2B6P58173 313 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 PRKCDQ05655 676 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 DAG1Q14118 895 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 GPR162Q16538 588 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 PCSK7Q16549 785 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 SLFN12LQ6IEE8 588 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 RNF149Q8NC42 400 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 PSD4Q8NDX1 1056 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 CHDHQ8NE62 594 aaPredicted RBP19.13■□□□□ 0.65
HMGA1-205ENST00000447654 ZNF566Q969W8 418 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 C8orf48Q96LL4 319 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 FEM1AQ9BSK4 669 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 MEAF6Q9HAF1 191 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 ACOXLQ9NUZ1 547 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 ADPRHL2Q9NX46 363 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 IL37Q9NZH6 218 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 NDUFAF1Q9Y375 327 aa19.13■□□□□ 0.65
HMGA1-205ENST00000447654 H0Y626 953 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 NME4O00746 187 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 TBX1O43435 398 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 SLC25A27O95847 323 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 C2P06681 752 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 PCNAP12004 261 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 ARSFP54793 590 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 FADDQ13158 208 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 PIGZQ86VD9 579 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 PTRH1Q86Y79 214 aaKnown RBP19.12■□□□□ 0.65
HMGA1-205ENST00000447654 MCFD2Q8NI22 146 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 STYXQ8WUJ0 223 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 ARNTL2Q8WYA1 636 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 ST6GAL2Q96JF0 529 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 SPATA33Q96N06 139 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 CGRRF1Q99675 332 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 IGKV6-21A0A0C4DH24 114 aa19.12■□□□□ 0.65
HMGA1-205ENST00000447654 hCG_2039718K7EN88 272 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms