RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 NOP14P78316 857 aaKnown RBP5.03□□□□□ -1.6
SDCBP-205ENST00000447267 B4GALNT1Q00973 533 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 PDE1CQ14123 709 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-205ENST00000447267 USP10Q14694 798 aaKnown RBP5.03□□□□□ -1.6
SDCBP-205ENST00000447267 ZNF284Q2VY69 593 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 SLC47A2Q86VL8 602 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 PARGQ86W56 976 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 FUKQ8N0W3 1084 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 SYT2Q8N9I0 419 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-205ENST00000447267 ATP11CQ8NB49 1132 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 SIMC1Q8NDZ2 872 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 CCDC112Q8NEF3 446 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 DDI1Q8WTU0 396 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 MYLPFQ96A32 169 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 TRAPPC9Q96Q05 1148 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 DDX50Q9BQ39 737 aaKnown RBP5.03□□□□□ -1.6
SDCBP-205ENST00000447267 TREX2Q9BQ50 279 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-205ENST00000447267 HAPLN2Q9GZV7 340 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 VPS11Q9H270 941 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 ABCB8Q9NUT2 735 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 RIC8BQ9NVN3 520 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 TMEM9Q9P0T7 183 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 APOBEC3BQ9UH17 382 aaKnown RBP5.03□□□□□ -1.6
SDCBP-205ENST00000447267 ING1Q9UK53 422 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-205ENST00000447267 L1RE1Q9UN81 338 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 MYH10P35580 1976 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 CYP3A7-CYP3A51PA0A087WV96 503 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 CCDC169A6NNP5 214 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 A6NNZ2 444 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 KPNA7A9QM74 516 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 hCG_1984214I3L0E3 225 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 HMBSP08397 361 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 CYP21A2P08686 494 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 KRT15P19012 456 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 SDSP20132 328 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 C5AR1P21730 350 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 HNRNPA2B1P22626 353 aaKnown RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 CYP3A7P24462 503 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 LMO2P25791 158 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 ALDH4A1P30038 563 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 CA5AP35218 305 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 EFNA5P52803 228 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 RRADP55042 308 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 TAS2R38P59533 333 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 RPS18P62269 152 aaKnown RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 SUMO1P63165 101 aaKnown RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 GUCY1A3Q02108 690 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 CNTN1Q12860 1018 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 KLF10Q13118 480 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 ARHGEF7Q14155 803 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 HNRNPA1L2Q32P51 320 aaKnown RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 C10orf62Q5T681 223 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 FAXCQ5TGI0 409 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 NKAIN2Q5VXU1 208 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 SEL1L3Q68CR1 1132 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 FAAH2Q6GMR7 532 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 FAM171BQ6P995 826 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 CASC1Q6TDU7 716 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 CWC27Q6UX04 472 aaKnown RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 VSTM1Q6UX27 236 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 MTDHQ86UE4 582 aaKnown RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 TAX1BP1Q86VP1 789 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 MICU3Q86XE3 530 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 ESX1Q8N693 406 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 ZNF713Q8N859 430 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 BMPERQ8N8U9 685 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 FAR1Q8WVX9 515 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 CFHR4Q92496 578 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 FBXW5Q969U6 566 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 DPYSL5Q9BPU6 564 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 EIF2AK1Q9BQI3 630 aaKnown RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 MRPL4Q9BYD3 311 aaKnown RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 ZMYND12Q9H0C1 365 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 PLEKHA5Q9HAU0 1116 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 CATSPERZQ9NTU4 200 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 LRIT1Q9P2V4 623 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 DDX25Q9UHL0 483 aaKnown RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 APPL1Q9UKG1 709 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 SARDHQ9UL12 918 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 DDX19BQ9UMR2 479 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 ZFR2Q9UPR6 939 aaKnown RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 TESMINQ9Y4I5 508 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 TMEM184BQ9Y519 407 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-205ENST00000447267 MGAM2Q2M2H8 2515 aa5.02□□□□□ -1.61
SDCBP-205ENST00000447267 A8MU76 341 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 B4E171 279 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 E7EWF7 191 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 TLR5O60602 858 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 STK10O94804 968 aaKnown RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 ZWINTO95229 277 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 CRTAMO95727 393 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 CPNE6O95741 557 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 ATP5BP06576 529 aaKnown RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 CLTAP09496 248 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 PDGFRBP09619 1106 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 POLR2EP19388 210 aaKnown RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 AOAHP28039 575 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 CASP14P31944 242 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 ADCY8P40145 1251 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 TSPAN7P41732 249 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms