RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 HNRNPA2B1P22626 353 aaKnown RBP17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 MCM3P25205 808 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 ARNTP27540 789 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 SSTR1P30872 391 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 UGT1A3P35503 534 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 UGT1A5P35504 534 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 PTGER3P43115 390 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 DHPSP49366 369 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 CLDN2P57739 230 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 GPX6P59796 221 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 PRAMEP78395 509 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 KYNUQ16719 465 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 PLK5Q496M5 336 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 SPANXN3Q5MJ09 141 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 HENMT1Q5T8I9 393 aaKnown RBP17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 ARMC3Q5W041 872 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 PMS2CLQ68D20 193 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 RAET1GQ6H3X3 334 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 KIAA0930Q6ICG6 404 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 CEP128Q6ZU80 1094 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 PNPLA1Q8N8W4 532 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 PRSS33Q8NF86 280 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 CENPTQ96BT3 561 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 PLEKHG4BQ96PX9 1271 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 ORAI3Q9BRQ5 295 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 C1QTNF7Q9BXJ2 289 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 UGT1A7Q9HAW7 530 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 UGT1A10Q9HAW8 530 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 UGT1A8Q9HAW9 530 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 NFKBIL1Q9UBC1 381 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 EIF2B4Q9UI10 523 aaKnown RBP17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 PCDHGA2Q9Y5H1 932 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 FAM169AQ9Y6X4 670 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 TDRD6O60522 2096 aaKnown RBP17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 RALGAPA1Q6GYQ0 2036 aa17.89■□□□□ 0.46
TRAPPC4-203ENST00000447216 A0A1W2PPC4 97 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 FADS2P1A8MWK0 482 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 H7C0S8 307 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 LILRB5O75023 590 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 PRAMEF1O95521 474 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 TTC4O95801 387 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 SOD1P00441 154 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 AKT2P31751 481 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 GPR1P46091 355 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 ARCN1P48444 511 aaKnown RBP17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 CDKN1CP49918 316 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 ATP13A5Q4VNC0 1218 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 ZRANB3Q5FWF4 1079 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 TRMT10BQ6PF06 316 aaKnown RBP17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 PTAR1Q7Z6K3 402 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 C11orf74Q86VG3 221 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 CCNJLQ8IV13 435 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 RAVER1Q8IY67 606 aaKnown RBP17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 AENQ8WTP8 325 aaKnown RBP17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 FOXJ1Q92949 421 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 PEX13Q92968 403 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 SERAC1Q96JX3 654 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 LENG8Q96PV6 779 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 TXLNGYQ9BZA5 131 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 MIR1-1HGQ9H1L0 117 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 SEMA4AQ9H3S1 761 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 VPS37BQ9H9H4 285 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 LRRC4CQ9HCJ2 640 aa17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 C20orf96Q9NUD7 363 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC4-203ENST00000447216 POM121BA6NF01 834 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 H0Y8X5 98 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 SRP72O76094 671 aaKnown RBP17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 ERVK-10P10266 1014 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 PAMP19021 973 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 CD27P26842 260 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 FOXN2P32314 431 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 CNR2P34972 360 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 PTPN5P54829 565 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 DPTQ07507 201 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 SIM2Q14190 667 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 INPP5AQ14642 412 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 SLMAPQ14BN4 828 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 LPAL2Q16609 132 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 LONRF1Q17RB8 773 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 ZDHHC20Q5W0Z9 365 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 PNCKQ6P2M8 343 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 AFTPHQ6ULP2 937 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 GCNT7Q6ZNI0 430 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 PRR23BQ6ZRT6 265 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 RELL1Q8IUW5 271 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 RGL4Q8IZJ4 473 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 TRAM1L1Q8N609 369 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 DENND6BQ8NEG7 585 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 OR4L1Q8NH43 312 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 ZNF398Q8TD17 642 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 SLC6A18Q96N87 628 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 C19orf43Q9BQ61 176 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 CDH19Q9H159 772 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 ASB8Q9H765 288 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 ARFGAP3Q9NP61 516 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 KCTD5Q9NXV2 234 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 MARCH4Q9P2E8 410 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 APPL1Q9UKG1 709 aa17.88■□□□□ 0.45
TRAPPC4-203ENST00000447216 TMPRSS11EQ9UL52 423 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms