RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 HGFP14210 728 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 CCKBRP32239 447 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 UGT1A5P35504 534 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 SPINT3P49223 89 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 OR1D5P58170 312 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 PDK1Q15118 436 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 TAZQ16635 292 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 MARK2Q7KZI7 788 aaKnown RBP20.63■□□□□ 0.89
SDC1-205ENST00000447124 RAB11FIP2Q7L804 512 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 GPR155Q7Z3F1 870 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 RHOT1Q8IXI2 618 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 RAVER1Q8IY67 606 aaKnown RBP20.63■□□□□ 0.89
SDC1-205ENST00000447124 EXD1Q8NHP7 514 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 KIAA1524Q8TCG1 905 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.63■□□□□ 0.89
SDC1-205ENST00000447124 AGAP3Q96P47 875 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 TRIB3Q96RU7 358 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 HAUS2Q9NVX0 235 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 TFR2Q9UP52 801 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 OAS3Q9Y6K5 1087 aaKnown RBP20.63■□□□□ 0.89
SDC1-205ENST00000447124 C1orf232A0A0U1RR37 186 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 AGRPO00253 132 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 PLD2O14939 933 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 CA4P22748 312 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 MAGEA1P43355 309 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 NOP2P46087 812 aaKnown RBP20.62■□□□□ 0.89
SDC1-205ENST00000447124 DYNLT1P63172 113 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 CXADRP78310 365 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 LLGL1Q15334 1064 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 SARM1Q6SZW1 724 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 KDELC2Q7Z4H8 507 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 ZNF438Q7Z4V0 828 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 SLITRK4Q8IW52 837 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 TADA1Q96BN2 335 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 IMP4Q96G21 291 aaKnown RBP20.62■□□□□ 0.89
SDC1-205ENST00000447124 TMEM74Q96NL1 305 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 OR2M4Q96R27 311 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 UBL7Q96S82 380 aaPredicted RBP20.62■□□□□ 0.89
SDC1-205ENST00000447124 DPH1Q9BZG8 443 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 BRD8Q9H0E9 1235 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 SEMA6CQ9H3T2 930 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 GOLPH3Q9H4A6 298 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 FAM83DQ9H4H8 585 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 CPNE5Q9HCH3 593 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 SAE1Q9UBE0 346 aaPredicted RBP20.62■□□□□ 0.89
SDC1-205ENST00000447124 DNPEPQ9ULA0 475 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 ALG6Q9Y672 507 aa20.62■□□□□ 0.89
SDC1-205ENST00000447124 FADS2P1A8MWK0 482 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 PPM1DO15297 605 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 ITGA2BP08514 1039 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 ZFXP17010 805 aaPredicted RBP20.61■□□□□ 0.89
SDC1-205ENST00000447124 ACTR1BP42025 376 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 MLLT3P42568 568 aaPredicted RBP20.61■□□□□ 0.89
SDC1-205ENST00000447124 CDKN2BP42772 138 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 ACTR1AP61163 376 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 ADCY2Q08462 1091 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 GALNT3Q14435 633 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 HENMT1Q5T8I9 393 aaKnown RBP20.61■□□□□ 0.89
SDC1-205ENST00000447124 ZNF574Q6ZN55 896 aaPredicted RBP20.61■□□□□ 0.89
SDC1-205ENST00000447124 USP53Q70EK8 1073 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 NT5DC3Q86UY8 548 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 STRADBQ9C0K7 418 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 SLC25A51Q9H1U9 297 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 DDX56Q9NY93 547 aaKnown RBP20.61■□□□□ 0.89
SDC1-205ENST00000447124 SEPT10Q9P0V9 454 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 PRKAB1Q9Y478 270 aa20.61■□□□□ 0.89
SDC1-205ENST00000447124 TRBV23OR9-2A0A075B6M9 112 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 DNAJC6O75061 913 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 ASMTLO95671 621 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 EML2O95834 649 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 ATP1A1P05023 1023 aaKnown RBP20.6■□□□□ 0.89
SDC1-205ENST00000447124 PYGLP06737 847 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 ALDH4A1P30038 563 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 SLC5A2P31639 672 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 HADHBP55084 474 aaKnown RBP20.6■□□□□ 0.89
SDC1-205ENST00000447124 EIF3IQ13347 325 aaKnown RBP20.6■□□□□ 0.89
SDC1-205ENST00000447124 NR1D2Q14995 579 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 AMZ1Q400G9 498 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 TEX44Q53QW1 395 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 PCSK4Q6UW60 755 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 LYSMD3Q7Z3D4 306 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 SPATA22Q8NHS9 363 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 TRIM5Q9C035 493 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 RDH14Q9HBH5 336 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 LOXL2Q9Y4K0 774 aa20.6■□□□□ 0.89
SDC1-205ENST00000447124 RGSL1A5PLK6 1076 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 RHPN2P1A8MT19 583 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 SPOPO43791 374 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 LCA5LO95447 670 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 MT-CYBP00156 380 aaPredicted RBP20.59■□□□□ 0.89
SDC1-205ENST00000447124 PIRTP0C851 137 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 PECAM1P16284 738 aaPredicted RBP20.59■□□□□ 0.89
SDC1-205ENST00000447124 CD1CP29017 333 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 ETV5P41161 510 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 CFHR1Q03591 330 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 ARHGAP40Q5TG30 622 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 TMC3Q7Z5M5 1100 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 NUDT22Q9BRQ3 303 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 ADGRE3Q9BY15 652 aa20.59■□□□□ 0.89
SDC1-205ENST00000447124 GLOD4Q9HC38 313 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms