RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CAMK2GQ13555 558 aaPredicted RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 INO80DQ53TQ3 878 aaPredicted RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 BORCS5Q969J3 196 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 PPM1MQ96MI6 270 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 PCDHAC1Q9H158 963 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 POLR3HQ9Y535 204 aaPredicted RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 UBXN8O00124 270 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 CBFA2T3O75081 653 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 HLA-DQB2P05538 268 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 COX7A2P14406 83 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 ALOX15P16050 662 aaPredicted RBP16.58■□□□□ 0.25
TCOF1-206ENST00000445265 ITGADQ13349 1161 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 PLD1Q13393 1074 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 SFT2D3Q587I9 215 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 DEPDC1Q5TB30 811 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 CYP4Z1Q86W10 505 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 PLD6Q8N2A8 252 aaKnown RBP16.58■□□□□ 0.25
TCOF1-206ENST00000445265 PSMG2Q969U7 264 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 OR52E6Q96RD3 313 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 ADI1Q9BV57 179 aa16.58■□□□□ 0.25
TCOF1-206ENST00000445265 CCDC189A1A4V9 331 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 FAM149AA5PLN7 773 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 TACR2P21452 398 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 ANXA11P50995 505 aaKnown RBP16.58■□□□□ 0.24
TCOF1-206ENST00000445265 POLR2LP62875 67 aaKnown RBP16.58■□□□□ 0.24
TCOF1-206ENST00000445265 OLIG2Q13516 323 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 AP5B1Q2VPB7 878 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 GPR180Q86V85 440 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 GPR152Q8TDT2 470 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 MTFMTQ96DP5 389 aaKnown RBP16.58■□□□□ 0.24
TCOF1-206ENST00000445265 BHMG1C9JSJ3 638 aaPredicted RBP16.58■□□□□ 0.24
TCOF1-206ENST00000445265 NRP1O14786 923 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 BCAS2O75934 225 aaPredicted RBP16.58■□□□□ 0.24
TCOF1-206ENST00000445265 GCAP28676 217 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 HERVK_113P63132 956 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 PLEKHG4Q58EX7 1191 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 ZNF618Q5T7W0 954 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 CERS6Q6ZMG9 384 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 ATAD1Q8NBU5 361 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 PRR11Q96HE9 360 aaPredicted RBP16.58■□□□□ 0.24
TCOF1-206ENST00000445265 ERVK-6Q9BXR3 956 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 TM6SF2Q9BZW4 377 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 MAGEH1Q9H213 219 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 SNTNA6NMZ2 147 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 HSPA14Q0VDF9 509 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 KCTD21Q4G0X4 260 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 CFAP52Q8N1V2 620 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 ZFAND2BQ8WV99 257 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 MED8Q96G25 268 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 ROGDIQ9GZN7 287 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 DUSP12Q9UNI6 340 aa16.58■□□□□ 0.24
TCOF1-206ENST00000445265 SCN7AQ01118 1682 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 NHSL1Q5SYE7 1610 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 LTBP3Q9NS15 1303 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 A0A088AWK7 358 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 DUSP11O75319 330 aaKnown RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 MED26O95402 600 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 HSMCR30P0CW71 290 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 CCDC85BQ15834 202 aaPredicted RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 FAM91A1Q658Y4 838 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 NUDT18Q6ZVK8 323 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 SCAMP5Q8TAC9 235 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 MAGEB10Q96LZ2 347 aaPredicted RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 MFSD1Q9H3U5 465 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 TFB2MQ9H5Q4 396 aaKnown RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 ATP13A3Q9H7F0 1226 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 G3V2T6 193 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 HPCAL1P37235 193 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 TRIP4Q15650 581 aaPredicted RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 IL23RQ5VWK5 629 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 SLC44A2Q8IWA5 706 aaPredicted RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 HM13Q8TCT9 377 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 REPS1Q96D71 796 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 MIEF1Q9NQG6 463 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 INTS10Q9NVR2 710 aaKnown RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 GMPPBQ9Y5P6 360 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 GSNP06396 782 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 DGCR6Q14129 220 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 METTL3Q86U44 580 aaKnown RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 ARFGAP1Q8N6T3 406 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 HJURPQ8NCD3 748 aaPredicted RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 RSPH1Q8WYR4 309 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 NUDT4Q9NZJ9 180 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 H2AFY2Q9P0M6 372 aaPredicted RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 TULP3O75386 442 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 CATP04040 527 aaKnown RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 GNPDA1P46926 289 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 GPR15P49685 360 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 GNA12Q03113 381 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 NIPAL4Q0D2K0 466 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 NR1D2Q14995 579 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 INTS11Q5TA45 600 aaKnown RBP16.57■□□□□ 0.24
TCOF1-206ENST00000445265 TMEM135Q86UB9 458 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 SYTL1Q8IYJ3 562 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 OTULINQ96BN8 352 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 ITCHQ96J02 903 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 FEM1CQ96JP0 617 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 ADGRE2Q9UHX3 823 aa16.57■□□□□ 0.24
TCOF1-206ENST00000445265 STX16-NPEPL1H3BU86 382 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms