RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 RNF157Q96PX1 679 aa23.55■■□□□ 1.36
TMEM238-201ENST00000444469 SEMA6CQ9H3T2 930 aa23.55■■□□□ 1.36
TMEM238-201ENST00000444469 STN1Q9H668 368 aaKnown RBP23.55■■□□□ 1.36
TMEM238-201ENST00000444469 NENFQ9UMX5 172 aa23.55■■□□□ 1.36
TMEM238-201ENST00000444469 HEY1Q9Y5J3 304 aa23.55■■□□□ 1.36
TMEM238-201ENST00000444469 SSU72P8A0A1W2PR75 194 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 CLDN7O95471 211 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 JCHAINP01591 159 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 FUCA1P04066 466 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 KDELR1P24390 212 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 CD86P42081 329 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 SKOR2Q2VWA4 1001 aaPredicted RBP23.54■■□□□ 1.36
TMEM238-201ENST00000444469 RFLNAQ6ZTI6 216 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 ZNF438Q7Z4V0 828 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 C17orf82Q86X59 251 aaPredicted RBP23.54■■□□□ 1.36
TMEM238-201ENST00000444469 SLITRK4Q8IW52 837 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 CCDC112Q8NEF3 446 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 PTCD2Q8WV60 388 aaKnown RBP23.54■■□□□ 1.36
TMEM238-201ENST00000444469 AHCYL2Q96HN2 611 aaKnown RBP23.54■■□□□ 1.36
TMEM238-201ENST00000444469 CCDC42Q96M95 316 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 SMIM14Q96QK8 99 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 MLPHQ9BV36 600 aaPredicted RBP23.54■■□□□ 1.36
TMEM238-201ENST00000444469 KCNK4Q9NYG8 393 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 DTLQ9NZJ0 730 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 ZNHIT2Q9UHR6 403 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 LOC400499M0QZD8 3231 aa23.54■■□□□ 1.36
TMEM238-201ENST00000444469 KCNK1O00180 336 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 B4GAT1O43505 415 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 ZFXP17010 805 aaPredicted RBP23.53■■□□□ 1.36
TMEM238-201ENST00000444469 NIPAL4Q0D2K0 466 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 AP1B1Q10567 949 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 RHOT2Q8IXI1 618 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 NAGSQ8N159 534 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 PQLC3Q8N755 202 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 ARRDC2Q8TBH0 407 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 LRRN4Q8WUT4 740 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 PATE1Q8WXA2 126 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 USP7Q93009 1102 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 SCARF2Q96GP6 870 aaPredicted RBP23.53■■□□□ 1.36
TMEM238-201ENST00000444469 DNAJC7Q99615 494 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 DPYSL5Q9BPU6 564 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 ACSL6Q9UKU0 697 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 SSUH2Q9Y2M2 353 aa23.53■■□□□ 1.36
TMEM238-201ENST00000444469 PRAMEF33A0A0G2JMD5 474 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 APOL1O14791 398 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 PPP1R12AO14974 1030 aaPredicted RBP23.52■■□□□ 1.36
TMEM238-201ENST00000444469 PRAMEF10O60809 474 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 C1QL1O75973 258 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 SOD1P00441 154 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 KRT1P04264 644 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 ARHGAP25P42331 645 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 NR1D2Q14995 579 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 KIF26BQ2KJY2 2108 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 PYCR3Q53H96 274 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 MANEAQ5SRI9 462 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 KIAA1614Q5VZ46 1190 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 ZNF843Q8N446 348 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 ZSCAN1Q8NBB4 408 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 SLC35G2Q8TBE7 412 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 RAPGEF5Q92565 580 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 LYSMD1Q96S90 227 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 AGAP2Q99490 1192 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 NUDT22Q9BRQ3 303 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 FAM83DQ9H4H8 585 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 VPS18Q9P253 973 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 PLEKHM1Q9Y4G2 1056 aa23.52■■□□□ 1.36
TMEM238-201ENST00000444469 BPTFQ12830 3046 aa23.51■■□□□ 1.35
TMEM238-201ENST00000444469 RGSL1A5PLK6 1076 aa23.51■■□□□ 1.35
TMEM238-201ENST00000444469 HGSO14964 777 aaPredicted RBP23.51■■□□□ 1.35
TMEM238-201ENST00000444469 CD82P27701 267 aa23.51■■□□□ 1.35
TMEM238-201ENST00000444469 PPIDQ08752 370 aaKnown RBP23.51■■□□□ 1.35
TMEM238-201ENST00000444469 TRA2AQ13595 282 aaKnown RBP eCLIP23.51■■□□□ 1.35
TMEM238-201ENST00000444469 C16orf72Q14CZ0 275 aa23.51■■□□□ 1.35
TMEM238-201ENST00000444469 CHST15Q7LFX5 561 aaPredicted RBP23.51■■□□□ 1.35
TMEM238-201ENST00000444469 CCDC74BQ96LY2 380 aa23.51■■□□□ 1.35
TMEM238-201ENST00000444469 SLC38A3Q99624 504 aa23.51■■□□□ 1.35
TMEM238-201ENST00000444469 ZNF487B1APH4 448 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 ANKRD66B4E2M5 251 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 ATP1A1P05023 1023 aaKnown RBP23.5■■□□□ 1.35
TMEM238-201ENST00000444469 SLC2A4P14672 509 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 CD1CP29017 333 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 CSTF2P33240 577 aaKnown RBP eCLIP23.5■■□□□ 1.35
TMEM238-201ENST00000444469 ETV5P41161 510 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 SPINT3P49223 89 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 GPLD1P80108 840 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 IFI35P80217 286 aaPredicted RBP23.5■■□□□ 1.35
TMEM238-201ENST00000444469 SLC10A2Q12908 348 aaPredicted RBP23.5■■□□□ 1.35
TMEM238-201ENST00000444469 PDK1Q15118 436 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 TGIF1Q15583 401 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 QPCTQ16769 361 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 CCDC70Q6NSX1 233 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 TMPRSS9Q7Z410 1059 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 RFX6Q8HWS3 928 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 OR10G6Q8NH81 332 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 COX14Q96I36 57 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 RMI1Q9H9A7 625 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 ABHD10Q9NUJ1 306 aa23.5■■□□□ 1.35
TMEM238-201ENST00000444469 TRBV23OR9-2A0A075B6M9 112 aa23.49■■□□□ 1.35
TMEM238-201ENST00000444469 IGHV5-10-1A0A0J9YXX1 117 aa23.49■■□□□ 1.35
TMEM238-201ENST00000444469 PPM1DO15297 605 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms