RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 CNGA3Q16281 694 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 RAET1GQ6H3X3 334 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 FOXR1Q6PIV2 292 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 RBM44Q6ZP01 1051 aaKnown RBP8.75□□□□□ -1.01
USP6NL-203ENST00000443016 KATNAL2Q8IYT4 538 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 LSMEM2Q8N112 164 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 PBKQ96KB5 322 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 CCDC3Q9BQI4 270 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 TLR10Q9BXR5 811 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 CARD9Q9H257 536 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 DPEP2Q9H4A9 486 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 ARNT2Q9HBZ2 717 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 FGF22Q9HCT0 170 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 SNX12Q9UMY4 172 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 PACSIN2Q9UNF0 486 aaPredicted RBP8.75□□□□□ -1.01
USP6NL-203ENST00000443016 PCDHA3Q9Y5H8 950 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 HEY1Q9Y5J3 304 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 SAR1BQ9Y6B6 198 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 DGKBQ9Y6T7 804 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 PTPRQQ9UMZ3 2332 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 A0A087WV48 116 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 NPIPB15A6NHN6 443 aaPredicted RBP8.74□□□□□ -1.01
USP6NL-203ENST00000443016 CES2O00748 559 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 PDHA1P08559 390 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 CES1P23141 567 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 CCNCP24863 283 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 TRIM23P36406 574 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 KIAA1024LP59773 190 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 GBE1Q04446 702 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 ISXQ2M1V0 245 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 C3orf38Q5JPI3 329 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 PERM1Q5SV97 790 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 CDCP2Q5VXM1 449 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 PAPD7Q5XG87 772 aaKnown RBP8.74□□□□□ -1.01
USP6NL-203ENST00000443016 Q6ZVL8 140 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 HEATR4Q86WZ0 1026 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 CCDC50Q8IVM0 306 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 WDR48Q8TAF3 677 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 FAM71BQ8TC56 605 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 OR1E3Q8WZA6 343 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 RBM15Q96T37 977 aaKnown RBP eCLIP8.74□□□□□ -1.01
USP6NL-203ENST00000443016 LGR4Q9BXB1 951 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 CARS2Q9HA77 564 aaKnown RBP8.74□□□□□ -1.01
USP6NL-203ENST00000443016 TNFRSF10CO14798 259 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 TCEA3O75764 348 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 URI1O94763 535 aaPredicted RBP8.74□□□□□ -1.01
USP6NL-203ENST00000443016 MYCLP1P12525 358 aaPredicted RBP8.74□□□□□ -1.01
USP6NL-203ENST00000443016 EIF2S3P41091 472 aaKnown RBP8.74□□□□□ -1.01
USP6NL-203ENST00000443016 ARSEP51690 589 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 DSC2Q02487 901 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 HSD11B1LQ7Z5J1 315 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 TSPAN33Q86UF1 283 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 PDZD3Q86UT5 571 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 TEX26Q8N6G2 289 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 KYQ8NBH2 561 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 EXD1Q8NHP7 514 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 RAPGEF5Q92565 580 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 DTD2Q96FN9 168 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 COQ10AQ96MF6 247 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 OSBPL9Q96SU4 736 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 NAP1L3Q99457 506 aaPredicted RBP8.74□□□□□ -1.01
USP6NL-203ENST00000443016 LGMNQ99538 433 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 TMEM168Q9H0V1 697 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 POLR1BQ9H9Y6 1135 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 CASS4Q9NQ75 786 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 CD84Q9UIB8 345 aa8.74□□□□□ -1.01
USP6NL-203ENST00000443016 ANKRD36A6QL64 1941 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 MYLKQ15746 1914 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 SHROOM3Q8TF72 1996 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 PRSS38A1L453 326 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 B4DGG1 531 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 KCNK1O00180 336 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 PSMD11O00231 422 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 TLX3O43711 291 aaPredicted RBP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 ZRANB2O95218 330 aaKnown RBP eCLIP8.73□□□□□ -1.011e-6■■■■■ 42
USP6NL-203ENST00000443016 CD46P15529 392 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 LHCGRP22888 699 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 KDELR1P24390 212 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 RBMS1P29558 406 aaKnown RBP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 SOX11P35716 441 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 GPR1P46091 355 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 COPS2P61201 443 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 CKAP4Q07065 602 aaKnown RBP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 ILF3Q12906 894 aaKnown RBP eCLIP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 PTPRRQ15256 657 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 TBC1D25Q3MII6 688 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 LRRC66Q68CR7 880 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 KCTD16Q68DU8 428 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 CCDC13Q8IYE1 715 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 PELI3Q8N2H9 469 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 OR6C4Q8NGE1 309 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 PIH1D2Q8WWB5 315 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 GRAMD1AQ96CP6 724 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 AP2M1Q96CW1 435 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 ATXN7L3BQ96GX2 97 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 NAF1Q96HR8 494 aaKnown RBP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 TSGA13Q96PP4 275 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 RNF157Q96PX1 679 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 MCCC1Q96RQ3 725 aaPredicted RBP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 SRA1Q9HD15 236 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms