RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 EPB41L1Q9H4G0 881 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 SMYD3Q9H7B4 428 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 CARS2Q9HA77 564 aaKnown RBP7.08□□□□□ -1.28
SSXP3-201ENST00000442971 COQ6Q9Y2Z9 468 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 ST14Q9Y5Y6 855 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 CCDC88CQ9P219 2028 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 O00370 1275 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 PRRG2O14669 202 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 SPTLC2O15270 562 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 SGSM2O43147 1006 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 ZNHIT1O43257 154 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 SMAD6O43541 496 aaKnown RBP7.07□□□□□ -1.28
SSXP3-201ENST00000442971 LDB2O43679 373 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 SCRG1O75711 98 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 MATN4O95460 622 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 PCCBP05166 539 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 RRM1P23921 792 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 HADHAP40939 763 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 ETV3P41162 512 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 TNFSF10P50591 281 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 ARG2P78540 354 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 GTF2BQ00403 316 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 HHEXQ03014 270 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 MFAP5Q13361 173 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 MTM1Q13496 603 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 FLYWCH1Q4VC44 716 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 PLEKHS1Q5SXH7 462 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 PRAMEF13Q5VWM6 474 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 CREB3L3Q68CJ9 461 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 FAM198BQ6UWH4 519 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 ISLR2Q6UXK2 745 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 TREML4Q6UXN2 200 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 PPP1R32Q7Z5V6 425 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 CCDC71Q8IV32 467 aaPredicted RBP7.07□□□□□ -1.28
SSXP3-201ENST00000442971 DSELQ8IZU8 1212 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 LGI2Q8N0V4 545 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 CRYBG2Q8N1P7 616 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 DEPDC4Q8N2C3 294 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 FAM222BQ8WU58 562 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 KLHL6Q8WZ60 621 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 EDEM1Q92611 657 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 PIGTQ969N2 578 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 RBMXL1Q96E39 390 aaKnown RBP7.07□□□□□ -1.28
SSXP3-201ENST00000442971 GPR137Q96N19 417 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 LRFN5Q96NI6 719 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 TGM7Q96PF1 710 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 LMF1Q96S06 567 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 HEPHQ9BQS7 1158 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 WRAP53Q9BUR4 548 aaKnown RBP7.07□□□□□ -1.28
SSXP3-201ENST00000442971 SARGQ9BW04 601 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 LNPKQ9C0E8 428 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 ZSCAN16Q9H4T2 348 aaPredicted RBP7.07□□□□□ -1.28
SSXP3-201ENST00000442971 L2HGDHQ9H9P8 463 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 SEPT11Q9NVA2 429 aaKnown RBP7.07□□□□□ -1.28
SSXP3-201ENST00000442971 TRNAU1APQ9NX07 287 aaKnown RBP7.07□□□□□ -1.28
SSXP3-201ENST00000442971 CR1P17927 2039 aa7.07□□□□□ -1.28
SSXP3-201ENST00000442971 NPHP3-ACAD11A0A0J9YXS1 232 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 CTIFO43310 598 aaKnown RBP7.06□□□□□ -1.28
SSXP3-201ENST00000442971 ENDOD1O94919 500 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 FOLR1P15328 257 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 NELFEP18615 380 aaKnown RBP7.06□□□□□ -1.28
SSXP3-201ENST00000442971 CTBSQ01459 385 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 CACNG1Q06432 222 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 TNK1Q13470 666 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 NCF4Q15080 339 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 CYP2A13Q16696 494 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 TUSC1Q2TAM9 212 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 LRRC73Q5JTD7 316 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 TMEM211Q6ICI0 200 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 CXorf57Q6NSI4 855 aaKnown RBP7.06□□□□□ -1.28
SSXP3-201ENST00000442971 USP45Q70EL2 814 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 TRAPPC11Q7Z392 1133 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 KCNK18Q7Z418 384 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 TMEM126BQ8IUX1 230 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 CCAR2Q8N163 923 aaKnown RBP7.06□□□□□ -1.28
SSXP3-201ENST00000442971 SFRP1Q8N474 314 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 LIX1Q8N485 282 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 MYCT1Q8N699 235 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.06□□□□□ -1.28
SSXP3-201ENST00000442971 PLA2G15Q8NCC3 412 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 RND1Q92730 232 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 MRGPRX2Q96LB1 330 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 VPS28Q9UK41 221 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 PADI2Q9Y2J8 665 aa7.06□□□□□ -1.28
SSXP3-201ENST00000442971 DYTNA2CJ06 578 aa7.05□□□□□ -1.28
SSXP3-201ENST00000442971 GOLGA8IPA6NC78 632 aa7.05□□□□□ -1.28
SSXP3-201ENST00000442971 GOLGA8JA6NMD2 632 aa7.05□□□□□ -1.28
SSXP3-201ENST00000442971 KLF7O75840 302 aaPredicted RBP7.05□□□□□ -1.28
SSXP3-201ENST00000442971 LDHAP00338 332 aaKnown RBP7.05□□□□□ -1.28
SSXP3-201ENST00000442971 ABCD1P33897 745 aa7.05□□□□□ -1.28
SSXP3-201ENST00000442971 SOX5P35711 763 aa7.05□□□□□ -1.28
SSXP3-201ENST00000442971 PEX19P40855 299 aa7.05□□□□□ -1.28
SSXP3-201ENST00000442971 ACTR1BP42025 376 aa7.05□□□□□ -1.28
SSXP3-201ENST00000442971 TBX4P57082 545 aa7.05□□□□□ -1.28
SSXP3-201ENST00000442971 ACTR1AP61163 376 aa7.05□□□□□ -1.28
SSXP3-201ENST00000442971 CCT2P78371 535 aaKnown RBP7.05□□□□□ -1.28
SSXP3-201ENST00000442971 NUCB2P80303 420 aa7.05□□□□□ -1.28
SSXP3-201ENST00000442971 PMP22Q01453 160 aa7.05□□□□□ -1.28
SSXP3-201ENST00000442971 CAPRIN1Q14444 709 aaKnown RBP7.05□□□□□ -1.28
SSXP3-201ENST00000442971 HYAL4Q2M3T9 481 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms