RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SUCLA2Q9P2R7 463 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZNF212Q9UDV6 495 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 PRDM4Q9UKN5 801 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 HPCAL4Q9UM19 191 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TBX20Q9UMR3 447 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 PACSIN2Q9UNF0 486 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 MRPS17Q9Y2R5 130 aaKnown RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 RIPK3Q9Y572 518 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ASTN2O75129 1339 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 NFASCO94856 1347 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 EMSYQ7Z589 1322 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 MYH7BA7E2Y1 1941 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 DENND3A2RUS2 1198 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMEM150BA6NC51 233 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 GOLGA8IPA6NC78 632 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 GOLGA8JA6NMD2 632 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 ANKRD63C9JTQ0 380 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 E5RJQ4 531 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 CCDC188H7C350 402 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 PGRMC1O00264 195 aaKnown RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 SOCS2O14508 198 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 PIP5K1BO14986 540 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 ASNA1O43681 348 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 CEP104O60308 925 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 HSF2BPO75031 334 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 RTN2O75298 545 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 FAM155BO75949 473 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 HEXIM1O94992 359 aaKnown RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 STBD1O95210 358 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 RASAL1O95294 804 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 SYF2O95926 243 aaKnown RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 FGBP02675 491 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 GZMAP12544 262 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 SCP2P22307 547 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 CNTFP26441 200 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 ADORA2AP29274 412 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 GTF2H1P32780 548 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 ICAM3P32942 547 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 USP8P40818 1118 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 MXI1P50539 228 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 DNA2P51530 1060 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 COPAP53621 1224 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 HMGCS2P54868 508 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 MFAP3P55082 362 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 MRPS25P82663 173 aaKnown RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 MAP2K1Q02750 393 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 GUCY2DQ02846 1103 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 PPATQ06203 517 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 DMP1Q13316 513 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 EFR3AQ14156 821 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 PSME4Q14997 1843 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 TWIST1Q15672 202 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 STXBP2Q15833 593 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 SNRNP35Q16560 246 aaKnown RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 TIGD6Q17RP2 521 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 FAM110CQ1W6H9 321 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 EPC2Q52LR7 807 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 XKR3Q5GH77 459 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 C1orf220Q5T0J3 134 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 PLA2G4FQ68DD2 849 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 MZT2BQ6NZ67 158 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC2A7Q6PXP3 512 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 KIAA0408Q6ZU52 694 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 ANO5Q75V66 913 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 TRMT1LQ7Z2T5 733 aaKnown RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 NT5DC3Q86UY8 548 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 HERC6Q8IVU3 1022 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 KLHL7Q8IXQ5 586 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 YAF2Q8IY57 180 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 GPD1LQ8N335 351 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 SDR16C5Q8N3Y7 309 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 RASGEF1CQ8N431 466 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 ESX1Q8N693 406 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 METTL13Q8N6R0 699 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 LRRC57Q8N9N7 239 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 EIF1ADQ8N9N8 165 aaKnown RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 USP38Q8NB14 1042 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMEM161BQ8NDZ6 487 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 MCPH1Q8NEM0 835 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 OR1N1Q8NGS0 311 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 CCDC26Q8TAB7 109 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 OLIG1Q8TAK6 271 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 SCFD2Q8WU76 684 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 RFFLQ8WZ73 363 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 HES6Q96HZ4 224 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 VPS50Q96JG6 964 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 CEP170P1Q96L14 293 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 IFT74Q96LB3 600 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 FAM81BQ96LP2 452 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 GDAP1L1Q96MZ0 367 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 KRT12Q99456 494 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 SYT11Q9BT88 431 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 FAM167BQ9BTA0 163 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 VN1R3Q9BXE9 311 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 QTRT1Q9BXR0 403 aaKnown RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 TEX13BQ9BXU2 312 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 MAGEB5Q9BZ81 275 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMEM117Q9H0C3 514 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZNF541Q9H0D2 1346 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms