RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 EBF2Q9HAK2 575 aa7.45□□□□□ -1.22
UBR3-205ENST00000439681 UGT1A7Q9HAW7 530 aa7.45□□□□□ -1.22
UBR3-205ENST00000439681 UGT1A10Q9HAW8 530 aa7.45□□□□□ -1.22
UBR3-205ENST00000439681 UGT1A8Q9HAW9 530 aa7.45□□□□□ -1.22
UBR3-205ENST00000439681 MBNL1Q9NR56 388 aaKnown RBP7.45□□□□□ -1.22
UBR3-205ENST00000439681 IARS2Q9NSE4 1012 aaKnown RBP7.45□□□□□ -1.22
UBR3-205ENST00000439681 ARGLU1Q9NWB6 273 aaPredicted RBP7.45□□□□□ -1.22
UBR3-205ENST00000439681 ZNF446Q9NWS9 450 aa7.45□□□□□ -1.22
UBR3-205ENST00000439681 SLC17A6Q9P2U8 582 aa7.45□□□□□ -1.22
UBR3-205ENST00000439681 CCDC163A0A0D9SF12 145 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 GLYATL1P3A0A0U1RQE8 302 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 FAM86C2PA6NEL3 165 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 LRRC72A6NJI9 287 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 AGAP14A8MT82 685 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 DYNC1I1O14576 645 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 RAD51BO15315 384 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 CD3EAPO15446 510 aaKnown RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 LAMTOR5O43504 91 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 LATO43561 262 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 SOD1P00441 154 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 IGHV4-34P06331 123 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 F7P08709 466 aaPredicted RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 NUDT17P0C025 328 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 GABRB3P28472 473 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 GCAP28676 217 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 MAT2AP31153 395 aaKnown RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 STX2P32856 288 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 FNTBP49356 437 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 CCR5P51681 352 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 PRAMEP78395 509 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 CSTF1Q05048 431 aaKnown RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 DPTQ07507 201 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 CASP8Q14790 479 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 EFTUD2Q15029 972 aaKnown RBP eCLIP7.44□□□□□ -1.22
UBR3-205ENST00000439681 ATP13A5Q4VNC0 1218 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 ZDHHC20Q5W0Z9 365 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 AFTPHQ6ULP2 937 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 LDB1Q86U70 411 aaPredicted RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 WDR5BQ86VZ2 330 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 CNTN4Q8IWV2 1026 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 TP53I13Q8NBR0 393 aaPredicted RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 PLA2G15Q8NCC3 412 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 OR2W6PQ8NHA6 318 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 ZNF398Q8TD17 642 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 AP2M1Q96CW1 435 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 NUS1Q96E22 293 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 CYTH2Q99418 400 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 GPR174Q9BXC1 333 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 CDH19Q9H159 772 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 RAD18Q9NS91 495 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 APPL1Q9UKG1 709 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 CNOT6Q9ULM6 557 aaKnown RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 FNDC3AQ9Y2H6 1198 aaKnown RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 PSAT1Q9Y617 370 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 ATG2BQ96BY7 2078 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 TRBV5-4A0A0C4DH59 114 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 FADS2P1A8MWK0 482 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 K7ESM1 405 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 PRAMEF1O95521 474 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 S1PR4O95977 384 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 CACNG1Q06432 222 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 SGCGQ13326 291 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 CTBP1Q13363 440 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 NFATC2Q13469 925 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 THOC5Q13769 683 aaKnown RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 USP39Q53GS9 565 aaKnown RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 ZRANB3Q5FWF4 1079 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 KIAA0895LQ68EN5 471 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 PSAPL1Q6NUJ1 521 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 SNX20Q7Z614 316 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 CILP2Q8IUL8 1156 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 DENND6AQ8IWF6 608 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 TRAM1L1Q8N609 369 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 NELL1Q92832 810 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 FUBP1Q96AE4 644 aaKnown RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 LENG8Q96PV6 779 aaPredicted RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 ORAI3Q9BRQ5 295 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 MCMBPQ9BTE3 642 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 DHRS4Q9BTZ2 278 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 SPATA16Q9BXB7 569 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 PPANQ9NQ55 473 aaKnown RBP7.44□□□□□ -1.22
UBR3-205ENST00000439681 CATSPERZQ9NTU4 200 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 VPS18Q9P253 973 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 PLAAQ9Y263 795 aa7.44□□□□□ -1.22
UBR3-205ENST00000439681 SLC31A1O15431 190 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 TCEA3O75764 348 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 FAM155BO75949 473 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 AHSGP02765 367 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 BCKDHBP21953 392 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 SLC1A2P43004 574 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 STAT4Q14765 748 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 LRRC14Q15048 493 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 GPR33Q49SQ1 333 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 FASTKD1Q53R41 847 aaKnown RBP7.43□□□□□ -1.22
UBR3-205ENST00000439681 ZNF789Q5FWF6 425 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 PNCKQ6P2M8 343 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 KDM7AQ6ZMT4 941 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 MARK2Q7KZI7 788 aaKnown RBP7.43□□□□□ -1.22
UBR3-205ENST00000439681 LONP2Q86WA8 852 aa7.43□□□□□ -1.22
UBR3-205ENST00000439681 PPM1NQ8N819 430 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms