RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 OMDQ99983 421 aa6.37□□□□□ -1.39
BDNF-211ENST00000439476 MRPL57Q9BQC6 102 aaKnown RBP6.37□□□□□ -1.39
BDNF-211ENST00000439476 PIF1Q9H611 641 aa6.37□□□□□ -1.39
BDNF-211ENST00000439476 REEP1Q9H902 201 aa6.37□□□□□ -1.39
BDNF-211ENST00000439476 POLR1BQ9H9Y6 1135 aa6.37□□□□□ -1.39
BDNF-211ENST00000439476 SPAG4Q9NPE6 437 aa6.37□□□□□ -1.39
BDNF-211ENST00000439476 ACSS2Q9NR19 701 aa6.37□□□□□ -1.39
BDNF-211ENST00000439476 HSFX1Q9UBD0 423 aa6.37□□□□□ -1.39
BDNF-211ENST00000439476 MYO5AQ9Y4I1 1855 aaKnown RBP6.37□□□□□ -1.39
BDNF-211ENST00000439476 SH3D21A4FU49 640 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 SYNDIG1LA6NDD5 238 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 SLC15A5A6NIM6 579 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 ARHGAP33O14559 1287 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 DBTP11182 482 aaKnown RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 SLC2A4P14672 509 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 NOVP48745 357 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 SLC9A3P48764 834 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 RGS21Q2M5E4 152 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 SFT2D3Q587I9 215 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 EEF1DP3Q658K8 133 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 BHLHB9Q6PI77 547 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 RTL10Q7L3V2 364 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 AKAP14Q86UN6 197 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 ZNF781Q8N8C0 355 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 FNDC5Q8NAU1 212 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 FAM136AQ96C01 138 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 POLR1EQ9GZS1 481 aaKnown RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 CDT1Q9H211 546 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 TBC1D14Q9P2M4 693 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 SNX8Q9Y5X2 465 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 TEX264Q9Y6I9 313 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 MYL12BO14950 172 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 DHX15O43143 795 aaKnown RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 ITM2AO43736 263 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 B4GALT4O60513 344 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 KCNH1O95259 989 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 IL12AP29459 219 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 PRDX6P30041 224 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 GMPSP49915 693 aaPredicted RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 ARHGDIBP52566 201 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 IL2P60568 153 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 GPR85P60893 370 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 ITGADQ13349 1161 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 CTXN3Q4LDR2 81 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 SLC39A4Q6P5W5 647 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 POTEHQ6S545 545 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 ABHD15Q6UXT9 468 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 DSG4Q86SJ6 1040 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 ZBTB46Q86UZ6 589 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 PDSS2Q86YH6 399 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 TRIM48Q8IWZ4 208 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 OR8H2Q8N162 312 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 ARRDC4Q8NCT1 418 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 WDR36Q8NI36 951 aaKnown RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 ADAM32Q8TC27 787 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 PTCD2Q8WV60 388 aaKnown RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 TMEM159Q96B96 161 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 COX4I2Q96KJ9 171 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 FAM126AQ9BYI3 521 aaPredicted RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 C1orf21Q9H246 121 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 MID1IP1Q9NPA3 183 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 NT5MQ9NPB1 228 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 PCDH12Q9NPG4 1184 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 ABCC13Q9NSE7 274 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 ROBO1Q9Y6N7 1651 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 SLC12A8A0AV02 714 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 EFCAB10A6NFE3 127 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 PSMD11O00231 422 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 PAPSS1O43252 624 aaPredicted RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 RNGTTO60942 597 aaKnown RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 MAFO75444 373 aaPredicted RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 IGSF6O95976 241 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 CATP04040 527 aaKnown RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 GM2AP17900 193 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 AOC1P19801 751 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 OGNP20774 298 aaKnown RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 UBA1P22314 1058 aaKnown RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 GPR15P49685 360 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 CDC42P60953 191 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 POLR2GP62487 172 aaKnown RBP eCLIP6.36□□□□□ -1.39
BDNF-211ENST00000439476 UBE3AQ05086 875 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 SMARCB1Q12824 385 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 TRAP1Q12931 704 aaKnown RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 DGKZQ13574 1117 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 PLA2G4EQ3MJ16 856 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 NADK2Q4G0N4 442 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 GPR107Q5VW38 600 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 FAM122CQ6P4D5 195 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 PROSER1Q86XN7 944 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 SIAH1Q8IUQ4 282 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 SLC41A1Q8IVJ1 513 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 PGAM4Q8N0Y7 254 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 UBR7Q8N806 425 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 PDPRQ8NCN5 879 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 REPS2Q8NFH8 660 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 CMASQ8NFW8 434 aaPredicted RBP6.36□□□□□ -1.39
BDNF-211ENST00000439476 ZFP28Q8NHY6 868 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 SLC2A14Q8TDB8 520 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 P2RY11Q96G91 374 aa6.36□□□□□ -1.39
BDNF-211ENST00000439476 HOPXQ9BPY8 73 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms