RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 LOXHD1Q8IVV2 1947 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZCWPW2A0A1B0GU75 182 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 XPNPEP2O43895 674 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 PORP16435 677 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 WARSP23381 471 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 GLUD2P49448 558 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 MCCD1P59942 119 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 CYP4F2P78329 520 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 CYP4F3Q08477 520 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 MERTKQ12866 999 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 DPYSQ14117 519 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 CCDC153Q494R4 210 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 GPR158Q5T848 1215 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 MARC1Q5VT66 337 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 GLB1LQ6UWU2 654 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZNF280BQ86YH2 543 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZCCHC7Q8N3Z6 543 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 FBXO32Q969P5 355 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 NSUN5Q96P11 429 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 TCF12Q99081 682 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 C6orf62Q9GZU0 229 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 CATSPERBQ9H7T0 1116 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 GLOD4Q9HC38 313 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 IFT80Q9P2H3 777 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 UXTQ9UBK9 157 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 PRPF19Q9UMS4 504 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 AAR2Q9Y312 384 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 PCDHGA7Q9Y5G6 932 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 MYO10Q9HD67 2058 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 GON4LQ3T8J9 2241 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 A0A0J9YYE9 177 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 MYO1GB0I1T2 1018 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 ANXA9O76027 345 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 MLNP12872 115 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 PAX3P23760 479 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 AXLP30530 894 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 OR1E1P30953 314 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 HSPA13P48723 471 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 FLT3LGP49771 235 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 DGKEP52429 567 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 SEMG2Q02383 582 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 STX5Q13190 355 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 MEP1AQ16819 746 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZNF362Q5T0B9 420 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 SLC2A7Q6PXP3 512 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 SPESP1Q6UW49 350 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 SLCO6A1Q86UG4 719 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 CUZD1Q86UP6 607 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 BORCS5Q969J3 196 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZFYVE19Q96K21 471 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 TBATAQ96M53 351 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 GLT1D1Q96MS3 346 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 FEM1AQ9BSK4 669 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 KATNBL1Q9H079 304 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 HPS4Q9NQG7 708 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 OXSMQ9NWU1 459 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 HCSTQ9UBK5 93 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 CDH9Q9ULB4 789 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 BOLA1Q9Y3E2 137 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 KNL1Q8NG31 2342 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 GPR182O15218 404 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 KATNA1O75449 491 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 CHRNA1P02708 482 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 ASGR1P07306 291 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 POLR2IP36954 125 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 NPY2RP49146 381 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 HARS2P49590 506 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 DIO3P55073 304 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 MTPNP58546 118 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 XIAPP98170 497 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 SIM2Q14190 667 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 SF3B4Q15427 424 aaKnown RBP eCLIP9.91□□□□□ -0.824e-7■■■□□ 16.7
CDC42SE1-202ENST00000439374 NHSL2Q5HYW2 709 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 PCID2Q5JVF3 399 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 PKN3Q6P5Z2 889 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 C16orf59Q7L2K0 433 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 IGFN1Q86VF2 1251 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 CMTR2Q8IYT2 770 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 DEPDC4Q8N2C3 294 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 SKA2Q8WVK7 121 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 SLCO4A1Q96BD0 722 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 HMCESQ96FZ2 354 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 ACOX2Q99424 681 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 IL12RB2Q99665 862 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 RASSF1Q9NS23 344 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 GMIPQ9P107 970 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 IGSF9Q9P2J2 1179 aa9.91□□□□□ -0.82
CDC42SE1-202ENST00000439374 PRSS51A0A1B0GVH4 220 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 KANSL1LA0AUZ9 987 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 KRBA1A5PL33 1030 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 SDHDO14521 159 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 MGEA5O60502 916 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 SH3BGRLO75368 114 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 CYP7B1O75881 506 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 MYO1DO94832 1006 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 NADKO95544 446 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 HAPLN1P10915 354 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 HGFP14210 728 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 AKR1A1P14550 325 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 KCNE1P15382 129 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms