RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 NAGSQ8N159 534 aa13.46□□□□□ -0.25
GARNL3-206ENST00000439286 LPCAT1Q8NF37 534 aa13.46□□□□□ -0.25
GARNL3-206ENST00000439286 CTNNBL1Q8WYA6 563 aaPredicted RBP13.46□□□□□ -0.25
GARNL3-206ENST00000439286 MAML1Q92585 1016 aa13.46□□□□□ -0.25
GARNL3-206ENST00000439286 SCAMP4Q969E2 229 aa13.46□□□□□ -0.25
GARNL3-206ENST00000439286 SH3KBP1Q96B97 665 aa13.46□□□□□ -0.25
GARNL3-206ENST00000439286 SCARF2Q96GP6 870 aaPredicted RBP13.46□□□□□ -0.25
GARNL3-206ENST00000439286 RIOK2Q9BVS4 552 aaKnown RBP13.46□□□□□ -0.25
GARNL3-206ENST00000439286 ASPSCR1Q9BZE9 553 aa13.46□□□□□ -0.25
GARNL3-206ENST00000439286 PCDH9Q9HC56 1237 aa13.46□□□□□ -0.25
GARNL3-206ENST00000439286 PKD2L2Q9NZM6 624 aa13.46□□□□□ -0.25
GARNL3-206ENST00000439286 UVRAGQ9P2Y5 699 aa13.46□□□□□ -0.25
GARNL3-206ENST00000439286 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.46□□□□□ -0.25
GARNL3-206ENST00000439286 DOCK9Q9BZ29 2069 aa13.46□□□□□ -0.26
GARNL3-206ENST00000439286 ASXL3Q9C0F0 2248 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 LOC400499M0QZD8 3231 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 IGHV1OR21-1A0A087WYE8 117 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 PROSCO94903 275 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 MAP3K6O95382 1288 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 CLDN7O95471 211 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 H2AFZP0C0S5 128 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 CCL4P13236 92 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 SLC2A4P14672 509 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 MAN1A1P33908 653 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 NOP2P46087 812 aaKnown RBP13.45□□□□□ -0.26
GARNL3-206ENST00000439286 STC1P52823 247 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 NFATC3Q12968 1075 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 ODF2Q5BJF6 829 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 NCBP2-AS2Q69YL0 99 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 TMEM71Q6P5X7 295 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 ZNF574Q6ZN55 896 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-206ENST00000439286 RFLNAQ6ZTI6 216 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 H2AFVQ71UI9 128 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 CHST15Q7LFX5 561 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-206ENST00000439286 PRICKLE2Q7Z3G6 844 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 TRIM74Q86UV6 250 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 VASH2Q86V25 355 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 IL22RA1Q8N6P7 574 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 FAM71BQ8TC56 605 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 PTCD2Q8WV60 388 aaKnown RBP13.45□□□□□ -0.26
GARNL3-206ENST00000439286 PATE1Q8WXA2 126 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 EXTL1Q92935 676 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 FATE1Q969F0 183 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 TSGA13Q96PP4 275 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 MLPHQ9BV36 600 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-206ENST00000439286 TDRD1Q9BXT4 1180 aaKnown RBP13.45□□□□□ -0.26
GARNL3-206ENST00000439286 MAK16Q9BXY0 300 aaKnown RBP13.45□□□□□ -0.26
GARNL3-206ENST00000439286 ADGRE3Q9BY15 652 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 DEF6Q9H4E7 631 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 FAM83DQ9H4H8 585 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 CBX8Q9HC52 389 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 SLC39A1Q9NY26 324 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 PLEKHM1Q9Y4G2 1056 aa13.45□□□□□ -0.26
GARNL3-206ENST00000439286 SMG1Q96Q15 3661 aaKnown RBP13.45□□□□□ -0.26
GARNL3-206ENST00000439286 A0A0U1RQS6 177 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 C1orf232A0A0U1RR37 186 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 SYCE3A1L190 88 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 RGSL1A5PLK6 1076 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 DUX1O43812 170 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 JCHAINP01591 159 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 FGF3P11487 239 aaPredicted RBP13.44□□□□□ -0.26
GARNL3-206ENST00000439286 MPSTP25325 297 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 ARSEP51690 589 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 RAB15P59190 212 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 KCNC4Q03721 635 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 SQSTM1Q13501 440 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 ATP13A4Q4VNC1 1196 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 DCAF12Q5T6F0 453 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 ALG1LQ6GMV1 187 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 SLC9B2Q86UD5 537 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 FAM129CQ86XR2 697 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 DTX1Q86Y01 620 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 CCDC13Q8IYE1 715 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.44□□□□□ -0.26
GARNL3-206ENST00000439286 JPH3Q8WXH2 748 aaPredicted RBP13.44□□□□□ -0.26
GARNL3-206ENST00000439286 AGAP2Q99490 1192 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.44□□□□□ -0.26
GARNL3-206ENST00000439286 RMI1Q9H9A7 625 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 ZNHIT6Q9NWK9 470 aaKnown RBP13.44□□□□□ -0.26
GARNL3-206ENST00000439286 VPS18Q9P253 973 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 PCDHGA4Q9Y5G9 962 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 PCDHGA3Q9Y5H0 932 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 MYLKQ15746 1914 aa13.44□□□□□ -0.26
GARNL3-206ENST00000439286 FASNP49327 2511 aaKnown RBP13.44□□□□□ -0.26
GARNL3-206ENST00000439286 TDRD6O60522 2096 aaKnown RBP13.43□□□□□ -0.26
GARNL3-206ENST00000439286 EFCAB7A8K855 629 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.43□□□□□ -0.26
GARNL3-206ENST00000439286 SNX2O60749 519 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 SOD1P00441 154 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 THRAP10827 490 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 PBX1P40424 430 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 CD86P42081 329 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 FASLGP48023 281 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 HHEXQ03014 270 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 SRSF6Q13247 344 aaKnown RBP13.43□□□□□ -0.26
GARNL3-206ENST00000439286 LINC00303Q3SY05 128 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 SNAP47Q5SQN1 464 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 CCDC70Q6NSX1 233 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 EXD3Q8N9H8 876 aa13.43□□□□□ -0.26
GARNL3-206ENST00000439286 AVL9Q8NBF6 648 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms